C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uracil DNA glycosylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102584 Ung-002 ENSMUSG00000029591 10090 + 5:114130926-114139321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102584 2.504±0.42 0.769±0.40 1.237±0.13 2.141±0.76 1.643±0.36 3.546±1.29 5.961±2.28 0.855±0.40 4.335±3.84 0.817±0.10 1.465±0.49 6.728±1.58 1.973±1.21 1.298±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VT CIL_0001VT_0002 CGP 5:114123926-114139323
CIL_00041E CIL_00041E_0002 CGP 5:114130386-114250761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004844 IDA uracil DNA N-glycosylase activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006281 TAS DNA repair
GO:0006284 IEA base-excision repair
GO:0016446 IGI somatic hypermutation of immunoglobulin genes
GO:0016447 IGI somatic recombination of immunoglobulin gene segments

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242576 UNG-001 protein_coding Homo_sapiens 0 800
ENST00000336865 UNG-005 protein_coding Homo_sapiens 0 800
ENST00000446767 UNG-002 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000539287 UNG-003 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000565839 UNGP1-001 processed_pseudogene Homo_sapiens 0 300

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