C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uracil-DNA glycosylase pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565839 UNGP1-001 ENSG00000260818 9606 + 16:51277852-51279112 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000565839
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000565839 0.034±0.00 0.153±0.00 0.154±0.00 0.214±0.00 0.076±0.00 0.065±0.00 0.128±0.00 0.102±0.00 0.186±0.05 0.030±0.00 0.029±0.01 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0001 UCNEbase 16:50459337-51906374
CIL_00090N CIL_00090N_0001 VISTA 16:50708342-51309204
CIL_0008AU CIL_0008AU_0001 VISTA 16:50722400-51323681
CIL_0008AT CIL_0008AT_0001 VISTA 16:50772237-51373198
CIL_0008AL CIL_0008AL_0001 VISTA 16:50795296-51396395
CIL_0007ZD CIL_0007ZD_0001 VISTA 16:50810409-51413005
CIL_0007WV CIL_0007WV_0001 VISTA 16:50813101-51414731
CIL_0008AK CIL_0008AK_0001 VISTA 16:50897210-51498451
CIL_0008AN CIL_0008AN_0001 VISTA 16:51055384-51656808
CIL_0007YA CIL_0007YA_0001 VISTA 16:51157888-51759114
CIL_0008AM CIL_0008AM_0001 VISTA 16:51226285-51827014
CIL_0008AP CIL_0008AP_0001 VISTA 16:51242814-51844190

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112275 Ung-003 protein_coding Mus_musculus 0 300
ENSMUST00000102584 Ung-002 protein_coding Mus_musculus 0 300
ENSMUST00000031587 Ung-001 protein_coding Mus_musculus 0 300
ENSMUST00000137402 Ung-005 protein_coding Mus_musculus 0 287
ENSMUST00000143455 Ung-004 processed_transcript Mus_musculus 0 222

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