C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110051M20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102594 1110051M20Rik-001 ENSMUSG00000040591 10090 - 2:91277830-91444642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLungOvaryTestisENSMUST00000102594
Transcript ID Adipose Brain Heart Kidney Lung Ovary Testis
ENSMUST00000102594 8.226±0.18 12.220±0.99 3.186±0.00 8.472±0.00 9.560±0.00 11.452±1.24 12.922±2.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278460 C11orf49-002 protein_coding Homo_sapiens 0 1225
ENST00000378615 C11orf49-007 protein_coding Homo_sapiens 0 1146
ENST00000378618 C11orf49-003 protein_coding Homo_sapiens 0 1011
ENST00000395460 C11orf49-006 protein_coding Homo_sapiens 0 1005
ENST00000522712 C11orf49-016 retained_intron Homo_sapiens 0 377
ENST00000525279 C11orf49-012 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000525895 C11orf49-004 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000526424 C11orf49-009 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000526827 C11orf49-021 protein_coding Homo_sapiens 0 604
ENST00000527234 C11orf49-018 processed_transcript Homo_sapiens 0 348
ENST00000527268 C11orf49-015 processed_transcript Homo_sapiens 0 676
ENST00000527667 C11orf49-011 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000527784 C11orf49-005 nonsense_mediated_decay Homo_sapiens 0 854
ENST00000528488 C11orf49-001 nonsense_mediated_decay Homo_sapiens 0 854
ENST00000531648 C11orf49-014 retained_intron Homo_sapiens 0 239
ENST00000532633 C11orf49-013 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000532840 C11orf49-023 retained_intron Homo_sapiens 0 457
ENST00000533124 C11orf49-010 processed_transcript Homo_sapiens 3e-31 139
ENST00000534249 C11orf49-017 nonsense_mediated_decay Homo_sapiens 0 610
ENST00000534581 C11orf49-020 processed_transcript Homo_sapiens 0 606

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