C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B9 protein domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102657 B9d1-001 ENSMUSG00000001039 10090 + 11:61505144-61512931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102657
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102657 18.365±10.69 12.164±1.25 13.506±1.36 7.569±1.95 8.393±1.84 10.309±2.57 5.239±0.48 19.575±1.29 1.798±1.01 15.929±2.54 1.275±0.38 34.295±14.37 6.730±4.42 109.763±51.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0007224 IMP smoothened signaling pathway
GO:0008158 IMP hedgehog receptor activity
GO:0016020 IDA membrane
GO:0032880 IMP regulation of protein localization
GO:0035869 IDA ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0036064 ISS ciliary basal body
GO:0042384 ISS cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0043010 IMP camera-type eye development
GO:0060271 IMP cilium morphogenesis
GO:0060563 IMP neuroepithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261499 B9D1-001 protein_coding Homo_sapiens 0 736
ENST00000268841 B9D1-003 protein_coding Homo_sapiens 0 510
ENST00000395615 B9D1-006 protein_coding Homo_sapiens 0 614
ENST00000395616 B9D1-005 protein_coding Homo_sapiens 0 621
ENST00000440841 B9D1-004 protein_coding Homo_sapiens 0 486
ENST00000461069 B9D1-008 protein_coding Homo_sapiens 0 614
ENST00000477478 B9D1-002 protein_coding Homo_sapiens 0 560
ENST00000477683 B9D1-007 retained_intron Homo_sapiens 0 512
ENST00000487415 B9D1-010 protein_coding Homo_sapiens 2e-25 119
ENST00000574508 B9D1-012 protein_coding Homo_sapiens 0 435
ENST00000575403 B9D1-014 protein_coding Homo_sapiens 0 560
ENST00000575478 B9D1-013 protein_coding Homo_sapiens 0 560
ENST00000582857 B9D1-015 nonsense_mediated_decay Homo_sapiens 0 344

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