C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC14 and spectrin domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102659 Sestd1-002 ENSMUSG00000042272 10090 - 2:77186555-77280592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102659
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102659 6.906±1.76 1.213±0.47 4.945±0.01 10.269±1.68 2.670±1.21 4.446±1.37 4.062±0.60 18.410±0.91 0.416±0.16 4.418±1.10 0.592±0.10 8.013±5.14 9.056±5.03 6.058±3.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C3 CIL_0004C3_0003 CGP 2:77009902-77280592
CIL_0004C4 CIL_0004C4_0003 CGP 2:77180340-77819639

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335289 SESTD1-002 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000426988 SESTD1-009 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000428443 SESTD1-001 protein_coding Homo_sapiens 0 2937
ENST00000435047 SESTD1-005 protein_coding Homo_sapiens 0 531
ENST00000440010 SESTD1-004 protein_coding Homo_sapiens 0 542
ENST00000446758 SESTD1-003 nonsense_mediated_decay Homo_sapiens 0 863
ENST00000486468 SESTD1-007 processed_transcript Homo_sapiens 0 460
ENST00000489901 SESTD1-008 retained_intron Homo_sapiens 0 448

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