C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC14 and spectrin domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102660 Sestd1-001 ENSMUSG00000042272 10090 - 2:77180340-77265768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102660 1.542±0.00 1.076±0.71 1.137±0.25 13.499±8.40 1.422±0.66 2.189±0.96 0.561±0.14 2.601±0.00 0.052±0.03 1.480±0.49 0.428±0.20 4.900±3.10 1.245±0.41 1.195±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C3 CIL_0004C3_0003 CGP 2:77009902-77280592
CIL_0004C4 CIL_0004C4_0003 CGP 2:77180340-77819639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0010314 IEA phosphatidylinositol-5-phosphate binding
GO:0032266 IEA phosphatidylinositol-3-phosphate binding
GO:0034704 IEA calcium channel complex
GO:0043325 IEA phosphatidylinositol-3,4-bisphosphate binding
GO:0070273 IEA phosphatidylinositol-4-phosphate binding
GO:0070300 IEA phosphatidic acid binding
GO:0080025 IEA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335289 SESTD1-002 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000426988 SESTD1-009 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000428443 SESTD1-001 protein_coding Homo_sapiens 0 3230
ENST00000435047 SESTD1-005 protein_coding Homo_sapiens 0 531
ENST00000440010 SESTD1-004 protein_coding Homo_sapiens 0 542
ENST00000446758 SESTD1-003 nonsense_mediated_decay Homo_sapiens 0 863
ENST00000486468 SESTD1-007 processed_transcript Homo_sapiens 0 460
ENST00000489901 SESTD1-008 retained_intron Homo_sapiens 0 448

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