C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102880 Ppp3r1-001 ENSMUSG00000033953 10090 + 11:17159263-17200375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102880 20.248±2.54 240.244±100.62 29.568±1.72 54.915±4.74 19.578±9.77 12.557±3.85 14.354±2.90 15.920±3.04 12.029±4.18 22.521±2.06 44.544±3.01 41.591±65.34 16.700±8.20 5.395±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I2 CIL_0008I2_0002 VISTA 11:16884831-17492556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001569 IMP patterning of blood vessels
GO:0001837 IMP epithelial to mesenchymal transition
GO:0004721 IMP phosphoprotein phosphatase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006470 IMP protein dephosphorylation
GO:0007507 IMP heart development
GO:0019899 IPI enzyme binding
GO:0034504 IMP protein localization to nucleus
GO:0042383 IDA sarcolemma
GO:0051531 IMP NFAT protein import into nucleus
GO:0060487 IMP lung epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234310 PPP3R1-001 protein_coding Homo_sapiens 0 1868
ENST00000406334 WDR92-001 nonsense_mediated_decay Homo_sapiens 0 712
ENST00000409377 PPP3R1-004 protein_coding Homo_sapiens 0 798
ENST00000409752 PPP3R1-003 protein_coding Homo_sapiens 0 1061
ENST00000614162 WDR92-201 protein_coding Homo_sapiens 0 712

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