C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec61, alpha subunit 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102981 Sec61a2-001 ENSMUSG00000025816 10090 - 2:5870987-5895432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102981 10.006±3.67 9.498±0.00 13.200±2.61 24.834±12.17 11.918±2.48 5.225±0.00 4.172±0.76 6.908±0.74 7.051±4.41 5.553±1.17 14.354±0.94 11.064±3.02 15.729±6.98 27.704±14.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0043022 IDA ribosome binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298428 SEC61A2-009 protein_coding Homo_sapiens 0 2154
ENST00000304267 SEC61A2-008 protein_coding Homo_sapiens 0 1663
ENST00000379017 SEC61A2-001 protein_coding Homo_sapiens 0 678
ENST00000379020 SEC61A2-010 protein_coding Homo_sapiens 0 1125
ENST00000379033 SEC61A2-201 protein_coding Homo_sapiens 0 2039
ENST00000379051 SEC61A2-011 protein_coding Homo_sapiens 0 678
ENST00000418772 SEC61A2-004 protein_coding Homo_sapiens 0 429
ENST00000419021 SEC61A2-014 protein_coding Homo_sapiens 0 610
ENST00000441368 SEC61A2-002 protein_coding Homo_sapiens 0 518
ENST00000457034 SEC61A2-003 protein_coding Homo_sapiens 0 381
ENST00000466451 SEC61A2-013 processed_transcript Homo_sapiens 0 265
ENST00000472221 SEC61A2-012 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000475268 SEC61A2-006 nonsense_mediated_decay Homo_sapiens 0 1663
ENST00000495368 SEC61A2-007 processed_transcript Homo_sapiens 0 1445

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