C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannoside acetylglucosaminyltransferase 5, isoenzyme B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103027 Mgat5b-001 ENSMUSG00000043857 10090 + 11:116918863-116986948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103027 0.019±0.01 0.070±0.02 0.016±0.00 16.904±5.35 0.071±0.01 0.035±0.01 0.087±0.02 0.058±0.03 0.076±0.00 0.014±0.00 0.029±0.01 0.055±0.02 0.015±0.00 0.367±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019B CIL_00019B_0002 CGP 11:116852440-116986948
CIL_000198 CIL_000198_0002 CGP 11:116918863-117159268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0006487 IDA protein N-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0030144 IDA alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301618 MGAT5B-001 protein_coding Homo_sapiens 0 3155
ENST00000374998 MGAT5B-005 processed_transcript Homo_sapiens 0 1378
ENST00000428789 MGAT5B-002 protein_coding Homo_sapiens 0 2625
ENST00000563153 MGAT5B-009 processed_transcript Homo_sapiens 0 444
ENST00000565043 MGAT5B-004 nonsense_mediated_decay Homo_sapiens 0 1504
ENST00000565675 MGAT5B-003 protein_coding Homo_sapiens 0 641
ENST00000568598 MGAT5B-006 retained_intron Homo_sapiens 0 449
ENST00000569840 MGAT5B-010 protein_coding Homo_sapiens 0 3188

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