C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain, phosphoinositide interacting 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103060 Wipi1-001 ENSMUSG00000041895 10090 - 11:109573331-109611432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103060 11.849±2.71 7.897±1.48 13.510±0.09 2.300±1.88 5.592±0.95 3.350±0.71 20.263±3.51 3.877±1.48 5.382±4.88 5.070±0.49 21.682±1.59 11.861±6.06 11.536±9.29 10.814±2.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GP CIL_0006GP_0002 CGP 11:109573331-109669656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000407 IEA pre-autophagosomal structure
GO:0000421 IEA autophagic vacuole membrane
GO:0005102 IEA receptor binding
GO:0005737 IEA cytoplasm
GO:0005802 IEA trans-Golgi network
GO:0005856 IEA cytoskeleton
GO:0006914 IEA autophagy
GO:0010008 IEA endosome membrane
GO:0030331 IEA estrogen receptor binding
GO:0031410 IEA cytoplasmic vesicle
GO:0032266 IEA phosphatidylinositol-3-phosphate binding
GO:0034045 IEA pre-autophagosomal structure membrane
GO:0048203 IEA vesicle targeting, trans-Golgi to endosome
GO:0050681 IEA androgen receptor binding
GO:0080025 IEA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262139 WIPI1-002 protein_coding Homo_sapiens 0 1615
ENST00000546360 WIPI1-004 protein_coding Homo_sapiens 0 1421
ENST00000586815 WIPI1-005 processed_transcript Homo_sapiens 0 859
ENST00000589316 WIPI1-001 nonsense_mediated_decay Homo_sapiens 0 1709
ENST00000589459 WIPI1-003 processed_transcript Homo_sapiens 0 1408
ENST00000590402 WIPI1-009 retained_intron Homo_sapiens 0 278
ENST00000591744 WIPI1-010 protein_coding Homo_sapiens 0 654
ENST00000592645 WIPI1-012 nonsense_mediated_decay Homo_sapiens 0 387

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