C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103164 Acsf2-001 ENSMUSG00000076435 10090 - 11:94557102-94601871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103164 18.908±4.90 50.422±10.40 14.107±0.40 3.147±0.16 19.520±3.60 35.589±5.47 6.794±0.74 11.077±0.44 21.918±18.36 13.387±1.51 0.969±0.21 21.893±6.59 6.498±2.73 1.804±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X5 CIL_0004X5_0003 CGP 11:94557102-94601871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006631 IEA fatty acid metabolic process
GO:0008150 ND biological_process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300441 ACSF2-001 protein_coding Homo_sapiens 0 1701
ENST00000427954 ACSF2-002 protein_coding Homo_sapiens 0 1616
ENST00000502667 ACSF2-005 protein_coding Homo_sapiens 0 1310
ENST00000503387 ACSF2-018 retained_intron Homo_sapiens 4e-29 132
ENST00000503408 ACSF2-008 nonsense_mediated_decay Homo_sapiens 3e-36 156
ENST00000504392 ACSF2-004 protein_coding Homo_sapiens 0 1339
ENST00000506052 ACSF2-023 retained_intron Homo_sapiens 2e-38 163
ENST00000506085 ACSF2-007 processed_transcript Homo_sapiens 2e-28 130
ENST00000506582 ACSF2-010 protein_coding Homo_sapiens 0 257
ENST00000507769 ACSF2-014 retained_intron Homo_sapiens 5e-29 132
ENST00000508245 ACSF2-012 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000508734 ACSF2-017 processed_transcript Homo_sapiens 0.00000005 60
ENST00000509806 ACSF2-015 processed_transcript Homo_sapiens 0.000000000000004 86
ENST00000510262 ACSF2-013 nonsense_mediated_decay Homo_sapiens 2e-31 139
ENST00000510410 ACSF2-003 nonsense_mediated_decay Homo_sapiens 0 1339
ENST00000511288 ACSF2-006 retained_intron Homo_sapiens 7e-29 132
ENST00000512119 ACSF2-019 processed_transcript Homo_sapiens 0 451
ENST00000512537 ACSF2-020 retained_intron Homo_sapiens 0 361
ENST00000513101 ACSF2-011 retained_intron Homo_sapiens 0 473
ENST00000513544 ACSF2-016 processed_transcript Homo_sapiens 1e-28 130
ENST00000570356 ACSF2-025 retained_intron Homo_sapiens 0 285

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