C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 13, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105436 Fam13c-201 ENSMUSG00000043259 10090 + 10:70440668-70558729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000105436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000105436 0.613±0.22 1.478±0.87 2.346±1.02 7.024±2.35 0.523±0.36 0.501±0.12 0.481±0.30 0.027±0.01 0.829±0.13 0.675±0.30 0.595±0.31 0.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090R CIL_00090R_0002 VISTA 10:70433384-71034387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373878 PHYHIPL-002 protein_coding Homo_sapiens 0 464
ENST00000373880 PHYHIPL-001 protein_coding Homo_sapiens 0 464
ENST00000422313 FAM13C-007 protein_coding Homo_sapiens 0 737
ENST00000435852 FAM13C-004 protein_coding Homo_sapiens 0 1050
ENST00000468696 FAM13C-012 protein_coding Homo_sapiens 0 396
ENST00000468840 FAM13C-006 protein_coding Homo_sapiens 0 1219
ENST00000470220 FAM13C-014 processed_transcript Homo_sapiens 0 540
ENST00000489341 FAM13C-013 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000503444 FAM13C-008 protein_coding Homo_sapiens 0 235
ENST00000510215 FAM13C-017 processed_transcript Homo_sapiens 0 233
ENST00000611933 FAM13C-002 protein_coding Homo_sapiens 0 902
ENST00000614220 FAM13C-005 protein_coding Homo_sapiens 0 2017
ENST00000618427 FAM13C-201 protein_coding Homo_sapiens 0 1489
ENST00000618804 FAM13C-001 protein_coding Homo_sapiens 0 1509
ENST00000621119 FAM13C-003 protein_coding Homo_sapiens 0 1999
ENST00000622363 FAM13C-010 nonsense_mediated_decay Homo_sapiens 0 1489

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