C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 11B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105600 Cdk11b-002 ENSMUSG00000029062 10090 + 4:155624883-155649938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105600 3.137±1.61 11.511±1.51 2.885±0.32 2.088±0.07 3.981±1.32 3.059±0.38 1.278±0.22 1.336±0.03 1.219±0.41 3.798±0.56 1.767±0.00 4.467±1.11 1.918±0.00 1.905±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006468 IEA protein phosphorylation
GO:0007049 IEA cell cycle
GO:0007088 IMP regulation of mitosis
GO:2001234 IMP negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000083701 cdk11b-201 protein_coding Danio_rerio 0 870
ENST00000226284 IBSP-001 protein_coding Homo_sapiens 0.0001 53
ENST00000317673 CDK11B-201 protein_coding Homo_sapiens 0 2335
ENST00000340677 CDK11B-005 protein_coding Homo_sapiens 0 2507
ENST00000341028 CDK11B-006 processed_transcript Homo_sapiens 0 497
ENST00000341832 CDK11B-001 protein_coding Homo_sapiens 0 2721
ENST00000356200 CDK11A-008 protein_coding Homo_sapiens 0 2401
ENST00000356937 CDK11A-010 retained_intron Homo_sapiens 0 1280
ENST00000357760 CDK11A-003 protein_coding Homo_sapiens 0 1964
ENST00000358779 CDK11A-004 protein_coding Homo_sapiens 0 2098
ENST00000378633 CDK11A-005 protein_coding Homo_sapiens 0 1714
ENST00000378638 CDK11A-027 protein_coding Homo_sapiens 0 2401
ENST00000401096 CDK11A-011 protein_coding Homo_sapiens 0 217
ENST00000404249 CDK11A-001 protein_coding Homo_sapiens 0 2615
ENST00000407249 CDK11B-003 protein_coding Homo_sapiens 0 1759
ENST00000460465 CDK11A-002 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000464748 CDK11A-025 retained_intron Homo_sapiens 0 329
ENST00000468800 CDK11A-024 retained_intron Homo_sapiens 0 536
ENST00000474916 CDK11A-017 retained_intron Homo_sapiens 0 425
ENST00000479362 CDK11A-007 protein_coding Homo_sapiens 0 496
ENST00000487462 CDK11A-013 retained_intron Homo_sapiens 0 217
ENST00000489300 CDK11A-018 retained_intron Homo_sapiens 0 265
ENST00000492390 CDK11A-016 retained_intron Homo_sapiens 0 278
ENST00000495016 CDK11A-023 processed_transcript Homo_sapiens 0 193
ENST00000498810 CDK11A-014 retained_intron Homo_sapiens 0 309
ENST00000509982 CDK11A-026 nonsense_mediated_decay Homo_sapiens 0 1245
ENST00000611150 CDK11B-004 nonsense_mediated_decay Homo_sapiens 0 1840
ENST00000615951 CDK11B-002 nonsense_mediated_decay Homo_sapiens 0 1760

Loading