C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 63
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105875 Trim63-201 ENSMUSG00000028834 10090 + 4:134315120-134329629 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105875
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105875 0.150±0.02 0.070±0.04 0.031±0.02 0.066±0.04 3.339±3.72 64.539±7.95 0.769±0.00 0.129±0.01 1.486±0.73 130.096±21.33 0.391±0.24 0.264±0.00 0.549±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0006936 ISA muscle contraction
GO:0008270 IEA zinc ion binding
GO:0010468 IMP regulation of gene expression
GO:0014732 IEA skeletal muscle atrophy
GO:0014878 IEA response to electrical stimulus involved in regulation of muscle adaptation
GO:0016567 IDA protein ubiquitination
GO:0031432 IEA titin binding
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043292 ISA contractile fiber
GO:0051384 IEA response to glucocorticoid
GO:0070555 IEA response to interleukin-1
GO:0071549 IDA cellular response to dexamethasone stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374272 TRIM63-001 protein_coding Homo_sapiens 0 1419
ENST00000483052 TRIM63-002 processed_transcript Homo_sapiens 0 553

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