C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: latrophilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106128 Lphn2-202 ENSMUSG00000028184 10090 - 3:148815586-148954635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungOvaryTestisENSMUST00000106128
Transcript ID Adrenal Brain Liver Lung Ovary Testis
ENSMUST00000106128 5.454±0.20 17.569±8.49 3.228±1.24 4.494±0.00 3.466±2.00 0.819±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082D CIL_00082D_0002 VISTA 3:148288609-148889434
CIL_00082A CIL_00082A_0002 VISTA 3:148289814-148890454
CIL_00082B CIL_00082B_0002 VISTA 3:148399787-149000479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086797 lphn3.1-202 protein_coding Danio_rerio 5e-28 132
ENSDART00000144208 lphn3.1-002 protein_coding Danio_rerio 5e-28 132
ENSDART00000146871 lphn3.1-001 protein_coding Danio_rerio 5e-28 132
ENST00000319517 LPHN2-004 protein_coding Homo_sapiens 0 2056
ENST00000359929 LPHN2-001 protein_coding Homo_sapiens 0 2056
ENST00000370713 LPHN2-003 protein_coding Homo_sapiens 0 2056
ENST00000370715 LPHN2-002 protein_coding Homo_sapiens 0 2056
ENST00000370717 LPHN2-201 protein_coding Homo_sapiens 0 3567
ENST00000370721 LPHN2-005 protein_coding Homo_sapiens 0 1668
ENST00000370723 LPHN2-011 protein_coding Homo_sapiens 0 2056
ENST00000370725 LPHN2-010 protein_coding Homo_sapiens 0 3650
ENST00000370727 LPHN2-009 protein_coding Homo_sapiens 0 3650
ENST00000370728 LPHN2-007 protein_coding Homo_sapiens 0 3567
ENST00000370730 LPHN2-008 protein_coding Homo_sapiens 0 3567
ENST00000402328 LPHN2-006 protein_coding Homo_sapiens 0 1664
ENST00000449420 LPHN2-012 protein_coding Homo_sapiens 0 4881
ENST00000464551 LPHN2-020 processed_transcript Homo_sapiens 0 346
ENST00000464775 LPHN2-017 processed_transcript Homo_sapiens 0 481
ENST00000469377 LPHN2-021 processed_transcript Homo_sapiens 0 1079
ENST00000472424 LPHN2-019 processed_transcript Homo_sapiens 0 481
ENST00000498776 LPHN2-018 processed_transcript Homo_sapiens 0 270

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