C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: human immunodeficiency virus type I enhancer binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106307 Hivep3-001 ENSMUSG00000028634 10090 + 4:119814495-120138045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106307
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106307 0.438±0.14 0.648±0.22 0.843±0.21 0.575±0.39 0.935±0.34 0.580±0.04 0.230±0.06 0.230±0.02 0.046±0.01 1.126±0.42 0.102±0.03 0.844±0.09 0.104±0.07 0.196±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0035914 IMP skeletal muscle cell differentiation
GO:0045893 ISA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000151468 hivep1-201 protein_coding Danio_rerio 0 195
ENSDART00000110201 hivep1-001 protein_coding Danio_rerio 0 195
ENST00000247584 HIVEP3-201 protein_coding Homo_sapiens 0 6375
ENST00000372583 HIVEP3-002 protein_coding Homo_sapiens 0 6457
ENST00000372584 HIVEP3-001 protein_coding Homo_sapiens 0 6360
ENST00000460604 HIVEP3-003 processed_transcript Homo_sapiens 0 1024
ENST00000491442 HIVEP3-005 processed_transcript Homo_sapiens 0 320

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