C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel CLIC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106609 Clcc1-002 ENSMUSG00000027884 10090 + 3:108653913-108678840 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106609 9.037±2.60 5.096±1.77 15.256±2.22 8.587±1.24 6.384±2.09 7.231±1.76 11.186±3.16 13.623±6.31 13.308±4.18 10.994±0.66 9.946±1.34 10.610±5.20 11.178±1.76 4.189±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0034707 IEA chloride channel complex
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302500 CLCC1-005 protein_coding Homo_sapiens 0 549
ENST00000348264 CLCC1-004 protein_coding Homo_sapiens 0 326
ENST00000356970 CLCC1-001 protein_coding Homo_sapiens 0 1227
ENST00000369968 CLCC1-201 protein_coding Homo_sapiens 0 379
ENST00000369969 CLCC1-202 protein_coding Homo_sapiens 0 603
ENST00000369970 CLCC1-003 protein_coding Homo_sapiens 0 791
ENST00000482889 CLCC1-006 processed_transcript Homo_sapiens 0 499

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