C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel CLIC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106613 Clcc1-001 ENSMUSG00000027884 10090 + 3:108653990-108678012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryTestisENSMUST00000106613
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000106613 1.845±0.86 1.500±0.16 4.096±0.00 2.813±0.81 1.708±0.25 2.484±0.00 2.305±0.69 1.809±0.02 1.231±0.12 3.477±0.88 1.251±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane
GO:0034707 IEA chloride channel complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302500 CLCC1-005 protein_coding Homo_sapiens 0 549
ENST00000348264 CLCC1-004 protein_coding Homo_sapiens 0 326
ENST00000356970 CLCC1-001 protein_coding Homo_sapiens 0 1173
ENST00000369968 CLCC1-201 protein_coding Homo_sapiens 0 326
ENST00000369969 CLCC1-202 protein_coding Homo_sapiens 0 549
ENST00000369970 CLCC1-003 protein_coding Homo_sapiens 0 737
ENST00000482889 CLCC1-006 processed_transcript Homo_sapiens 0 499

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