C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hemoglobin beta, bh2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106866 Hbb-bh2-001 ENSMUSG00000078621 10090 - 7:103839145-103840427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000106866
Transcript ID Brain Placenta
ENSMUST00000106866 0.051±0.00 0.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0006 CGP 7:103826534-103840427
CIL_0003R8 CIL_0003R8_0008 CGP 7:103839145-103843164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0005833 IEA hemoglobin complex
GO:0008150 ND biological_process
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292896 HBE1-201 protein_coding Homo_sapiens 7e-24 115
ENST00000330597 HBG1-001 protein_coding Homo_sapiens 8e-18 95
ENST00000336906 HBG2-201 protein_coding Homo_sapiens 6e-18 95
ENST00000380237 HBE1-001 protein_coding Homo_sapiens 7e-24 115
ENST00000380252 HBG2-004 protein_coding Homo_sapiens 7e-18 95
ENST00000380259 HBG2-001 protein_coding Homo_sapiens 2e-17 95
ENST00000444587 HBG2-003 processed_transcript Homo_sapiens 3e-18 95
ENST00000620888 HBG2-202 protein_coding Homo_sapiens 6e-18 95

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