C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chordin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107084 Chrdl2-002 ENSMUSG00000030732 10090 + 7:100009914-100034728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000107084
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000107084 0.020±0.00 0.057±0.01 0.088±0.00 0.022±0.00 0.390±0.28 0.072±0.02 0.135±0.04 0.020±0.01 0.125±0.00 1.195±0.74 0.154±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0030154 IDA cell differentiation
GO:0030514 IDA negative regulation of BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263671 CHRDL2-001 protein_coding Homo_sapiens 0 699
ENST00000376324 CHRDL2-007 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000376332 CHRDL2-002 protein_coding Homo_sapiens 0 948
ENST00000525413 CHRDL2-009 protein_coding Homo_sapiens 0 377
ENST00000528471 CHRDL2-006 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000534159 CHRDL2-004 processed_transcript Homo_sapiens 0 702
ENST00000534276 CHRDL2-005 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000622063 CHRDL2-201 protein_coding Homo_sapiens 0 654

Loading