C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 618
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107415 Zfp618-001 ENSMUSG00000028358 10090 + 4:62965573-63139708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107415 0.494±0.00 0.516±0.31 0.176±0.00 1.615±0.21 0.209±0.04 1.031±0.19 0.091±0.02 1.400±0.63 0.652±0.84 0.256±0.14 0.050±0.01 1.882±0.58 0.206±0.09 0.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CA CIL_0002CA_0003 CGP 4:62559847-63139708
CIL_0008AD CIL_0008AD_0002 VISTA 4:62756998-63358386
CIL_0004P3 CIL_0004P3_0002 CGP 4:62965573-63154799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288466 ZNF618-201 protein_coding Homo_sapiens 0 2390
ENST00000374124 ZNF618-005 protein_coding Homo_sapiens 0 521
ENST00000374126 ZNF618-004 protein_coding Homo_sapiens 0 3807
ENST00000452710 ZNF618-001 protein_coding Homo_sapiens 0 418
ENST00000470105 ZNF618-002 processed_transcript Homo_sapiens 0 2196
ENST00000481558 ZNF618-003 processed_transcript Homo_sapiens 0 462
ENST00000615615 ZNF618-202 protein_coding Homo_sapiens 0 3264

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