C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008AD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs641 VISTA 9606 9:113664156-114265533
GeneTranscriptPositionBiotype
ENSG00000106927 (AMBP)
alpha-1-microglobulin/bikunin precursor 		ENST00000265132 (AMBP-001) 114060127-114078472 protein_coding
ENST00000466610 (AMBP-003) 114060992-114074969 protein_coding
ENST00000540645 (AMBP-005) 114060910-114077608 retained_intron
ENST00000603230 (AMBP-004) 114061500-114078328 nonsense_mediated_decay
ENSG00000136883 (KIF12)
kinesin family member 12 		ENST00000374118 (KIF12-001) 114091638-114099057 protein_coding
ENST00000468460 (KIF12-003) 114091638-114099227 nonsense_mediated_decay
ENST00000473174 (KIF12-004) 114093306-114097716 processed_transcript
ENST00000491059 (KIF12-007) 114097400-114097936 processed_transcript
ENST00000498016 (KIF12-005) 114086126-114093917 processed_transcript
ENSG00000157657 (ZNF618)
zinc finger protein 618 		ENST00000288466 (ZNF618-201) 113876282-114056591 protein_coding
ENST00000374124 (ZNF618-005) 113876350-114032724 protein_coding
ENST00000374126 (ZNF618-004) 113876282-114050221 protein_coding
ENST00000452710 (ZNF618-001) 113876350-114032723 protein_coding
ENST00000470105 (ZNF618-002) 114027921-114050221 processed_transcript
ENST00000481558 (ZNF618-003) 113876382-114030882 processed_transcript
ENST00000615615 (ZNF618-202) 113876282-114056591 protein_coding
ENSG00000196739 (COL27A1)
collagen, type XXVII, alpha 1 		ENST00000356083 (COL27A1-001) 114155560-114312511 protein_coding
ENST00000451716 (COL27A1-004) 114167715-114218579 protein_coding
ENST00000468565 (COL27A1-003) 114307032-114311528 processed_transcript
ENST00000477421 (COL27A1-006) 114268807-114274230 processed_transcript
ENST00000485397 (COL27A1-005) 114240220-114246121 retained_intron
ENST00000490831 (COL27A1-008) 114306213-114309339 processed_transcript
ENST00000494090 (COL27A1-002) 114168608-114311548 nonsense_mediated_decay
ENST00000494780 (COL27A1-007) 114300362-114301542 processed_transcript
ENSG00000214669 (RP11-18B16.1)
 ENST00000398764 (RP11-18B16.1-001) 113758994-113759419 processed_pseudogene
ENSG00000227482 (RP11-18B16.2)
 ENST00000428292 (RP11-18B16.2-001) 113650956-113682855 lincRNA
ENSG00000232905 (RP11-534I8.1)
 ENST00000437852 (RP11-534I8.1-001) 113850687-113851632 processed_pseudogene
CIL_0008AD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs641 VISTA 10090 4:62756998-63358386
GeneTranscriptPositionBiotype
ENSMUSG00000028356 (Ambp)
alpha 1 microglobulin/bikunin 		ENSMUST00000030041 (Ambp-001) 63143275-63154173 protein_coding
ENSMUST00000142901 (Ambp-002) 63152698-63154799 protein_coding
ENSMUSG00000028357 (Kif12)
kinesin family member 12 		ENSMUST00000030042 (Kif12-005) 63165637-63172131 protein_coding
ENSMUST00000124739 (Kif12-003) 63167729-63171189 processed_transcript
ENSMUST00000131760 (Kif12-001) 63165634-63172046 processed_transcript
ENSMUST00000154234 (Kif12-002) 63169407-63171730 processed_transcript
ENSMUST00000156618 (Kif12-004) 63167477-63170797 processed_transcript
ENSMUSG00000028358 (Zfp618)
zinc finger protein 618 		ENSMUST00000030043 (Zfp618-002) 62965573-63115748 protein_coding
ENSMUST00000064814 (Zfp618-201) 62965574-63134030 protein_coding
ENSMUST00000107415 (Zfp618-001) 62965573-63139708 protein_coding
ENSMUST00000151324 (Zfp618-003) 63120400-63121428 processed_transcript
ENSMUSG00000028359 (Orm3)
orosomucoid 3 		ENSMUST00000006687 (Orm3-001) 63356162-63359511 protein_coding
ENSMUSG00000039196 (Orm1)
orosomucoid 1 		ENSMUST00000030044 (Orm1-001) 63344560-63348163 protein_coding
ENSMUSG00000045672 (Col27a1)
collagen, type XXVII, alpha 1 		ENSMUST00000036300 (Col27a1-001) 63215435-63334991 protein_coding
ENSMUST00000125504 (Col27a1-002) 63214004-63292831 retained_intron
ENSMUST00000148751 (Col27a1-003) 63215412-63275093 retained_intron
ENSMUST00000149856 (Col27a1-006) 63283513-63333749 retained_intron
ENSMUST00000151992 (Col27a1-005) 63330993-63334138 processed_transcript
ENSMUST00000183913 (Col27a1-007) 63282667-63333720 nonsense_mediated_decay
ENSMUST00000184067 (Col27a1-004) 63234286-63333713 nonsense_mediated_decay
ENSMUSG00000082141 (Gm11212)
predicted gene 11212 		ENSMUST00000118337 (Gm11212-001) 63350411-63353846 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AD_0001ENSG00000106927ENST00000265132ENST00000466610ENST00000540645ENST00000603230ENSG00000136883ENST00000374118ENST00000468460ENST00000473174ENST00000491059ENST00000498016ENSG00000157657ENST00000288466ENST00000374124ENST00000374126ENST00000452710ENST00000470105ENST00000481558ENST00000615615ENSG00000196739ENST00000356083ENST00000451716ENST00000468565ENST00000477421ENST00000485397ENST00000490831ENST00000494090ENST00000494780ENSG00000214669ENST00000398764ENSG00000227482ENST00000428292ENSG00000232905ENST00000437852CIL_0008AD_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AD_0001ENSG00000106927ENST00000265132ENST00000466610ENST00000540645ENST00000603230ENSG00000136883ENST00000374118ENST00000468460ENST00000473174ENST00000491059ENSG00000157657ENST00000288466ENST00000374124ENST00000374126ENST00000452710ENST00000481558ENST00000615615ENSG00000196739ENST00000356083ENST00000451716ENST00000468565ENST00000494090ENSG00000214669ENST00000398764ENSG00000227482ENST00000428292ENSG00000232905ENST00000437852CIL_0008AD_0002ENSMUSG00000028356ENSMUST00000030041ENSMUST00000142901ENSMUSG00000028357ENSMUST00000030042ENSMUST00000124739ENSMUST00000131760ENSMUST00000154234ENSMUST00000156618ENSMUSG00000028358ENSMUST00000030043ENSMUST00000064814ENSMUST00000107415ENSMUSG00000028359ENSMUST00000006687ENSMUSG00000039196ENSMUST00000030044ENSMUSG00000045672ENSMUST00000036300ENSMUST00000125504ENSMUST00000148751ENSMUST00000149856ENSMUST00000151992ENSMUST00000183913ENSMUST00000184067ENSMUSG00000082141ENSMUST00000118337
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106927 ENST00000265132 N/A N/A N/A N/A 4.520±0.00 N/A 0.052±0.00 858.484±852.99 1061.344±1061.07 N/A N/A 0.579±0.63 0.371±0.00 0.133±0.00
ENST00000466610 0.144±0.00 0.066±0.00 N/A N/A 0.209±0.00 0.038±0.00 0.071±0.05 N/A 863.112±0.00 N/A N/A N/A N/A 0.257±0.07
ENST00000540645 N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.01 0.101±0.05
ENST00000603230 N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A 0.101±0.00 0.119±0.10 N/A 0.035±0.00 N/A
ENSG00000136883 ENST00000374118 0.076±0.00 N/A 1.830±0.00 0.081±0.00 0.029±0.00 0.267±0.00 0.027±0.00 17.484±0.00 0.833±0.00 N/A N/A N/A 0.768±0.34 0.358±0.00
ENST00000468460 N/A N/A N/A N/A N/A N/A N/A 2.744±2.55 0.283±0.25 N/A N/A 5.384±3.50 0.114±0.00 N/A
ENST00000473174 N/A N/A N/A 0.417±0.28 N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A 0.206±0.00 0.757±0.00
ENST00000491059 N/A N/A 9.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157657 ENST00000288466 0.639±0.00 0.582±0.00 N/A N/A N/A N/A N/A 1.033±0.00 N/A 0.188±0.00 N/A 0.748±0.46 0.455±0.14 0.420±0.00
ENST00000374124 N/A N/A N/A N/A 0.888±0.00 N/A N/A N/A N/A N/A N/A 1.146±0.00 N/A N/A
ENST00000374126 N/A N/A 1.765±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.938±0.00
ENST00000452710 N/A N/A N/A N/A N/A 0.611±0.00 N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A
ENST00000470105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481558 N/A N/A 4.502±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615615 0.203±0.00 N/A N/A N/A 0.390±0.08 0.370±0.06 0.118±0.01 1.331±0.00 N/A N/A 0.140±0.00 0.850±0.72 0.158±0.00 1.487±0.00
ENSG00000196739 ENST00000356083 N/A 3.842±0.00 1.449±0.00 0.176±0.14 0.413±0.00 1.156±0.00 0.724±0.00 1.516±0.93 0.638±0.00 0.651±0.55 N/A 4.959±2.07 3.658±1.07 0.605±0.00
ENST00000451716 N/A N/A 1.176±0.00 N/A 0.339±0.00 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468565 N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494090 N/A 3.434±0.00 N/A 0.106±0.00 0.335±0.10 0.206±0.00 N/A 0.913±0.00 N/A N/A 0.059±0.00 1.809±0.41 1.395±0.15 N/A
ENST00000494780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214669 ENST00000398764 N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227482 ENST00000428292 0.089±0.00 N/A N/A 0.059±0.02 0.090±0.00 N/A N/A 0.011±0.00 0.059±0.00 N/A N/A 0.083±0.03 0.039±0.00 0.090±0.01
ENSG00000232905 ENST00000437852 N/A 0.016±0.00 N/A N/A 0.017±0.00 N/A N/A 0.016±0.00 N/A 0.148±0.00 N/A N/A N/A 0.015±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028356 ENSMUST00000030041 0.166±0.15 0.383±0.10 0.089±0.00 0.038±0.00 2.010±1.21 0.756±0.30 0.352±0.12 1.203±0.25 1133.306±286.85 0.443±0.26 0.107±0.00 0.458±0.33 36.681±39.83 0.144±0.00
ENSMUST00000142901 N/A 0.533±0.00 N/A N/A N/A 0.625±0.00 N/A N/A N/A N/A N/A 0.627±0.00 N/A 0.636±0.00
ENSMUSG00000028357 ENSMUST00000030042 0.202±0.00 0.019±0.00 N/A 0.018±0.01 0.024±0.01 7.353±2.40 N/A 62.318±7.71 2.555±2.03 0.021±0.01 N/A 0.632±0.29 0.932±0.82 0.011±0.00
ENSMUST00000124739 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.078±0.00 N/A N/A 0.747±0.00 0.108±0.00 N/A
ENSMUST00000131760 N/A N/A 0.005±0.00 0.016±0.00 0.025±0.00 1.663±0.17 N/A 13.251±2.79 0.497±0.44 0.043±0.01 N/A 0.208±0.12 0.159±0.11 0.016±0.00
ENSMUST00000154234 N/A 0.113±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.01 N/A
ENSMUST00000156618 N/A N/A N/A 0.087±0.00 N/A N/A 0.052±0.00 N/A N/A 0.044±0.00 N/A N/A 0.144±0.00 N/A
ENSMUSG00000028358 ENSMUST00000030043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.647±0.42
ENSMUST00000064814 N/A 0.625±0.06 N/A N/A N/A 2.435±0.51 N/A N/A 0.150±0.06 0.449±0.00 N/A 5.123±0.82 0.063±0.00 4.247±1.49
ENSMUST00000107415 0.494±0.00 0.516±0.31 0.176±0.00 1.615±0.21 0.209±0.04 1.031±0.19 0.091±0.02 1.400±0.63 0.652±0.84 0.256±0.14 0.050±0.01 1.882±0.58 0.206±0.09 0.396±0.00
ENSMUST00000151324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028359 ENSMUST00000006687 1.417±0.90 N/A 0.278±0.00 N/A 2.602±0.93 N/A 0.101±0.04 0.279±0.14 8.548±2.43 N/A 0.054±0.00 0.423±0.23 0.181±0.19 0.233±0.22
ENSMUSG00000039196 ENSMUST00000030044 194.319±129.46 21.585±4.89 4.283±1.41 0.024±0.00 76.768±19.84 0.560±0.18 1.687±0.74 4.661±0.83 318.401±290.18 2.807±0.88 0.649±0.68 8.220±9.17 0.732±0.67 0.695±0.93
ENSMUSG00000045672 ENSMUST00000036300 1.020±0.62 1.645±0.19 1.361±0.00 0.417±0.16 1.210±0.52 2.038±0.69 0.414±0.24 4.480±2.31 1.246±0.72 1.646±0.80 0.332±0.05 3.266±1.33 1.142±0.20 0.979±0.39
ENSMUST00000125504 N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A
ENSMUST00000148751 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.802±0.53
ENSMUST00000151992 4.325±0.00 5.257±0.00 N/A N/A N/A 3.112±0.00 N/A N/A 1.646±0.00 N/A N/A 9.463±3.27 0.851±0.00 N/A
ENSMUST00000183913 1.570±0.15 2.340±0.34 1.443±0.00 0.616±0.00 2.108±0.25 2.869±0.52 0.357±0.00 3.225±0.87 1.187±0.32 1.211±0.00 0.171±0.04 4.132±0.60 0.784±0.00 4.504±2.34
ENSMUST00000184067 N/A N/A N/A 1.636±0.00 N/A N/A N/A N/A N/A N/A N/A 3.142±0.00 0.575±0.28 N/A
ENSMUSG00000082141 ENSMUST00000118337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00

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