C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107424 Rgs3-004 ENSMUSG00000059810 10090 + 4:62619582-62659840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000107424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000107424 5.324±1.60 0.919±0.01 2.757±0.06 1.790±0.59 3.679±0.72 2.307±0.28 4.326±0.39 2.273±0.07 0.663±0.19 9.256±1.31 1.051±0.42 5.101±1.36 1.837±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D0 CIL_0004D0_0002 CGP 4:62525369-62704001
CIL_0002CA CIL_0002CA_0003 CGP 4:62559847-63139708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317613 RGS3-002 protein_coding Homo_sapiens 0 1694
ENST00000343817 RGS3-006 protein_coding Homo_sapiens 0 1661
ENST00000350696 RGS3-202 protein_coding Homo_sapiens 0 1387
ENST00000374136 RGS3-013 protein_coding Homo_sapiens 0 1694
ENST00000374140 RGS3-001 protein_coding Homo_sapiens 0 1387
ENST00000394646 RGS3-203 protein_coding Homo_sapiens 0 1661
ENST00000460000 RGS3-025 retained_intron Homo_sapiens 0 497
ENST00000462143 RGS3-017 protein_coding Homo_sapiens 1.96182e-44 185
ENST00000464306 RGS3-028 processed_transcript Homo_sapiens 0 514
ENST00000466314 RGS3-027 processed_transcript Homo_sapiens 0 496
ENST00000470775 RGS3-023 processed_transcript Homo_sapiens 0 381
ENST00000478599 RGS3-015 retained_intron Homo_sapiens 0 1387
ENST00000492676 RGS3-022 processed_transcript Homo_sapiens 0 473
ENST00000496113 RGS3-026 protein_coding Homo_sapiens 0 494
ENST00000496264 RGS3-024 processed_transcript Homo_sapiens 0 383

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