C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 143
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107716 Tmem143-002 ENSMUSG00000002781 10090 + 7:45897101-45917409 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000107716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000107716 3.322±0.21 10.879±0.55 1.273±0.00 1.515±0.23 2.380±0.00 2.864±0.25 6.030±0.00 1.899±1.10 1.702±0.34 2.212±0.72 0.748±0.00 1.164±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293261 TMEM143-001 protein_coding Homo_sapiens 0 1280
ENST00000377431 TMEM143-005 protein_coding Homo_sapiens 0 785
ENST00000435956 TMEM143-002 protein_coding Homo_sapiens 0 968
ENST00000593914 TMEM143-008 retained_intron Homo_sapiens 0 320
ENST00000595720 TMEM143-003 retained_intron Homo_sapiens 0 320
ENST00000597370 TMEM143-013 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000598012 TMEM143-012 processed_transcript Homo_sapiens 0 224
ENST00000598926 TMEM143-010 protein_coding Homo_sapiens 0 320
ENST00000599220 TMEM143-009 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000600816 TMEM143-016 retained_intron Homo_sapiens 0 616
ENST00000601332 TMEM143-006 retained_intron Homo_sapiens 0 226
ENST00000601522 TMEM143-011 protein_coding Homo_sapiens 0 396

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