C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 143
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377431 TMEM143-005 ENSG00000161558 9606 - 19:48332357-48363938 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryTestisENST00000377431
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000377431 0.733±0.00 0.304±0.00 0.899±0.80 0.331±0.00 6.311±0.00 1.156±0.29 1.528±1.11 1.088±0.00 0.557±0.13 0.741±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107716 Tmem143-002 protein_coding Mus_musculus 0 785
ENSMUST00000069772 Tmem143-001 protein_coding Mus_musculus 0 785
ENSMUST00000135554 Tmem143-003 nonsense_mediated_decay Mus_musculus 0 619
ENSMUST00000140243 Tmem143-006 protein_coding Mus_musculus 0 394
ENSMUST00000153045 Tmem143-005 retained_intron Mus_musculus 0 228
ENSMUST00000125809 Tmem143-007 processed_transcript Mus_musculus 0 226
ENSMUST00000140766 Tmem143-004 retained_intron Mus_musculus 0 226
ENSMUST00000155615 Tmem143-008 processed_transcript Mus_musculus 4e-34 150

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