C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STRA6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107783 1300002K09Rik-001 ENSMUSG00000028327 10090 + 4:45848664-45887008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyPlacentaENSMUST00000107783
Transcript ID Bladder Breast Colon Kidney Placenta
ENSMUST00000107783 0.184±0.00 0.103±0.00 2.067±0.64 0.694±0.00 0.159±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0034633 IGI retinol transport
GO:0071939 IMP vitamin A import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000531758 RP11-23J9.7-001 unitary_pseudogene Homo_sapiens 0 952

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