C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific petidase 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108232 Usp45-004 ENSMUSG00000040455 10090 + 4:21776298-21837872 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryTestisENSMUST00000108232
Transcript ID Adrenal Breast Colon Liver Lung Ovary Testis
ENSMUST00000108232 3.011±1.34 1.491±0.04 2.148±0.46 1.736±0.00 2.252±0.62 3.246±1.71 4.174±0.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327681 USP45-003 protein_coding Homo_sapiens 0 1424
ENST00000329966 USP45-004 protein_coding Homo_sapiens 0 929
ENST00000369232 USP45-006 processed_transcript Homo_sapiens 0 532
ENST00000369233 USP45-007 protein_coding Homo_sapiens 0 1323
ENST00000472914 USP45-005 protein_coding Homo_sapiens 0 904
ENST00000496518 USP45-001 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000500704 USP45-008 protein_coding Homo_sapiens 0 1450
ENST00000506871 USP45-002 nonsense_mediated_decay Homo_sapiens 0 1103
ENST00000507717 USP45-010 protein_coding Homo_sapiens 0 612
ENST00000511403 USP45-012 protein_coding Homo_sapiens 0 268

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