C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 444
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108567 Zfp444-001 ENSMUSG00000044876 10090 + 7:6172482-6190422 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryTestisENSMUST00000108567
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000108567 1.332±0.61 1.916±0.09 2.845±0.00 1.114±0.00 2.171±0.39 4.198±1.08 1.811±0.32 1.848±0.31 3.817±1.42 1.105±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Z CIL_00045Z_0002 CGP 7:6131489-6191349
CIL_00046H CIL_00046H_0002 CGP 7:6172226-6216137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337080 ZNF444-001 protein_coding Homo_sapiens 0 774
ENST00000587236 ZNF444-002 retained_intron Homo_sapiens 0 468
ENST00000587664 ZNF444-005 processed_transcript Homo_sapiens 0 375
ENST00000592949 ZNF444-013 protein_coding Homo_sapiens 0 789

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