C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-induced proliferation-associated 1 like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108775 Sipa1l2-201 ENSMUSG00000001995 10090 - 8:125418063-125492710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000108775
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000108775 13.609±0.00 2.355±0.00 7.831±2.30 1.424±0.81 1.078±0.60 2.155±0.17 0.577±0.00 0.905±0.03 5.408±2.43 9.257±7.80 6.512±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087G CIL_00087G_0002 VISTA 8:124917043-125519851
CIL_0006B0 CIL_0006B0_0002 CGP 8:125054195-125492710
CIL_00086G CIL_00086G_0002 VISTA 8:125257735-125859984
CIL_0006AV CIL_0006AV_0002 CGP 8:125418063-125673359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000147385 SIPA1L3-001 protein_coding Danio_rerio 0 305
ENSDART00000113275 CABZ01030262.1-201 protein_coding Danio_rerio 9e-36 158
ENST00000262861 SIPA1L2-201 protein_coding Homo_sapiens 0 4724
ENST00000308942 SIPA1L2-002 protein_coding Homo_sapiens 0 1938
ENST00000366630 SIPA1L2-001 protein_coding Homo_sapiens 0 4724

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