C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATX1 (antioxidant protein 1) homolog 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108857 Atox1-001 ENSMUSG00000018585 10090 - 11:55446641-55461239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108857 220.910±54.49 270.522±7.58 202.474±43.26 41.333±28.30 188.641±64.61 134.174±9.95 65.976±16.94 277.480±20.16 135.048±35.63 121.446±25.65 29.454±4.23 170.086±59.56 158.108±82.33 53.526±24.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IC CIL_0007IC_0003 CGP 11:55394500-55461239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005375 IEA copper ion transmembrane transporter activity
GO:0005507 IEA copper ion binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0006825 IMP copper ion transport
GO:0006878 IMP cellular copper ion homeostasis
GO:0006979 IEA response to oxidative stress
GO:0015680 IEA intracellular copper ion transport
GO:0016531 IEA copper chaperone activity
GO:0032767 IEA copper-dependent protein binding
GO:0035434 IEA copper ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313115 ATOX1-201 protein_coding Homo_sapiens 0 248
ENST00000520382 ATOX1-004 protein_coding Homo_sapiens 0 228
ENST00000521264 ATOX1-002 protein_coding Homo_sapiens 0 228
ENST00000522145 ATOX1-005 retained_intron Homo_sapiens 5e-32 141
ENST00000522314 ATOX1-006 protein_coding Homo_sapiens 0 228
ENST00000522710 ATOX1-003 protein_coding Homo_sapiens 0 248
ENST00000524142 ATOX1-001 protein_coding Homo_sapiens 0 248

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