C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019353-ENSDARG00000087693 CGP 7955 14:26948448-26995224
GeneTranscriptPositionBiotype
ENSDARG00000019353 (sparc)
secreted acidic cysteine rich glycoprotein 		ENSDART00000039660 (sparc-001) 26948448-26966413 protein_coding
ENSDART00000135627 (sparc-002) 26950996-26966357 protein_coding
ENSDART00000141304 (sparc-004) 26952232-26959504 protein_coding
ENSDART00000141916 (sparc-006) 26950770-26952567 retained_intron
ENSDART00000142572 (sparc-005) 26953539-26959268 retained_intron
ENSDART00000146022 (sparc-003) 26954293-26966365 protein_coding
ENSDARG00000087693 (atox1)
ATX1 antioxidant protein 1 homolog (yeast) 		ENSDART00000123053 (atox1-201) 26992519-26995224 protein_coding
CIL_0007IC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113140-ENSG00000177556 CGP 9606 5:151661096-151772532
GeneTranscriptPositionBiotype
ENSG00000113140 (SPARC)
secreted protein, acidic, cysteine-rich (osteonectin) 		ENST00000231061 (SPARC-001) 151661096-151687165 protein_coding
ENST00000520687 (SPARC-002) 151662488-151667654 retained_intron
ENST00000521327 (SPARC-003) 151672597-151686975 retained_intron
ENST00000521569 (SPARC-005) 151666477-151686968 protein_coding
ENST00000522348 (SPARC-004) 151673178-151686963 protein_coding
ENST00000524277 (SPARC-006) 151667474-151671829 retained_intron
ENST00000537849 (SPARC-009) 151666425-151667584 processed_transcript
ENST00000538026 (SPARC-008) 151666373-151686963 protein_coding
ENST00000539687 (SPARC-007) 151671570-151685230 protein_coding
ENST00000620972 (SPARC-201) 151661100-151685660 protein_coding
ENSG00000145907 (G3BP1)
GTPase activating protein (SH3 domain) binding protein 1 		ENST00000356245 (G3BP1-002) 151771943-151805350 protein_coding
ENST00000394123 (G3BP1-001) 151771910-151812785 protein_coding
ENST00000507878 (G3BP1-009) 151771954-151794222 protein_coding
ENST00000517947 (G3BP1-010) 151771954-151795575 nonsense_mediated_decay
ENST00000518726 (G3BP1-003) 151771952-151787386 retained_intron
ENST00000519832 (G3BP1-004) 151771952-151791750 retained_intron
ENST00000520006 (G3BP1-012) 151772279-151791026 protein_coding
ENST00000520177 (G3BP1-006) 151771954-151805349 nonsense_mediated_decay
ENST00000520578 (G3BP1-008) 151771084-151791063 protein_coding
ENST00000522367 (G3BP1-011) 151771954-151795575 nonsense_mediated_decay
ENST00000522666 (G3BP1-013) 151772504-151797369 nonsense_mediated_decay
ENST00000522761 (G3BP1-005) 151771924-151804225 nonsense_mediated_decay
ENST00000523519 (G3BP1-007) 151771045-151791029 protein_coding
ENSG00000177556 (ATOX1)
antioxidant 1 copper chaperone 		ENST00000313115 (ATOX1-201) 151742823-151758649 protein_coding
ENST00000520382 (ATOX1-004) 151742822-151753895 protein_coding
ENST00000521264 (ATOX1-002) 151742316-151752426 protein_coding
ENST00000522145 (ATOX1-005) 151742822-151746563 retained_intron
ENST00000522314 (ATOX1-006) 151742822-151752118 protein_coding
ENST00000522710 (ATOX1-003) 151746046-151758656 protein_coding
ENST00000524142 (ATOX1-001) 151742822-151772532 protein_coding
ENSG00000213433 (RP11-54C4.1)
 ENST00000473923 (RP11-54C4.1-001) 151765897-151766239 transcribed_processed_pseudogene
ENST00000518134 (RP11-54C4.1-002) 151765859-151766378 processed_transcript
ENSG00000253921 (CTB-113P19.3)
 ENST00000518182 (CTB-113P19.3-001) 151753992-151767247 antisense
ENSG00000272112 (CTB-113P19.5)
 ENST00000607135 (CTB-113P19.5-001) 151724831-151725356 lincRNA
ENSG00000275765 (RP11-54C4.3)
uncharacterized protein LOC100652758 		ENST00000617069 (RP11-54C4.3-201) 151769793-151771508 protein_coding
ENST00000623943 (RP11-54C4.3-001) 151770242-151771508 antisense
CIL_0007IC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018593-ENSMUSG00000018585 CGP 10090 11:55394500-55461239
GeneTranscriptPositionBiotype
ENSMUSG00000018585 (Atox1)
ATX1 (antioxidant protein 1) homolog 1 (yeast) 		ENSMUST00000108857 (Atox1-001) 55446641-55461239 protein_coding
ENSMUST00000138412 (Atox1-002) 55446644-55461197 processed_transcript
ENSMUSG00000018593 (Sparc)
secreted acidic cysteine rich glycoprotein 		ENSMUST00000018737 (Sparc-001) 55394500-55420080 protein_coding
ENSMUST00000108858 (Sparc-002) 55394500-55419898 protein_coding
ENSMUST00000123775 (Sparc-006) 55395386-55399574 processed_transcript
ENSMUST00000125787 (Sparc-004) 55409204-55419900 processed_transcript
ENSMUST00000130642 (Sparc-005) 55395520-55402165 processed_transcript
ENSMUST00000141530 (Sparc-003) 55399252-55419898 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IC_0001ENSDARG00000019353ENSDART00000039660ENSDART00000135627ENSDART00000141304ENSDART00000141916ENSDART00000142572ENSDART00000146022ENSDARG00000087693ENSDART00000123053CIL_0007IC_0002ENSG00000113140ENST00000231061ENST00000520687ENST00000521327ENST00000521569ENST00000522348ENST00000524277ENST00000537849ENST00000538026ENST00000539687ENST00000620972ENSG00000145907ENST00000356245ENST00000394123ENST00000507878ENST00000517947ENST00000518726ENST00000519832ENST00000520006ENST00000520177ENST00000520578ENST00000522367ENST00000522666ENST00000522761ENST00000523519ENSG00000177556ENST00000313115ENST00000520382ENST00000521264ENST00000522145ENST00000522314ENST00000522710ENST00000524142ENSG00000213433ENST00000473923ENST00000518134ENSG00000253921ENST00000518182ENSG00000272112ENST00000607135ENSG00000275765ENST00000617069ENST00000623943CIL_0007IC_0003ENSMUSG00000018585ENSMUST00000108857ENSMUST00000138412ENSMUSG00000018593ENSMUST00000018737ENSMUST00000108858ENSMUST00000123775ENSMUST00000125787ENSMUST00000130642ENSMUST00000141530
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IC_0001ENSDARG00000019353ENSDART00000039660ENSDARG00000087693ENSDART00000123053CIL_0007IC_0002ENSG00000113140ENST00000231061ENST00000520687ENST00000521569ENST00000620972ENSG00000145907ENST00000356245ENST00000394123ENST00000522761ENSG00000177556ENST00000313115ENSG00000213433ENST00000473923ENST00000518134ENSG00000253921ENST00000518182ENSG00000272112ENST00000607135ENSG00000275765ENST00000617069ENST00000623943CIL_0007IC_0003ENSMUSG00000018585ENSMUST00000108857ENSMUSG00000018593ENSMUST00000018737ENSMUST00000108858ENSMUST00000130642ENSMUST00000141530
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019353 ENSDART00000039660 N/A N/A N/A 28.063±4.80 N/A N/A 40.392±17.77 91.230±39.14 0.840±0.00 N/A 104.049±0.00 N/A N/A N/A
ENSDART00000135627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087693 ENSDART00000123053 N/A N/A N/A 40.712±21.94 N/A N/A 29.028±18.72 56.833±25.47 0.959±0.00 N/A 10.509±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113140 ENST00000231061 N/A N/A 4.687±0.00 13.008±0.00 27.815±0.00 9.551±0.00 9.446±0.00 7.130±0.00 25.349±0.00 14.045±0.00 6.057±0.00 47.682±19.37 147.848±1.09 N/A
ENST00000520687 397.457±0.00 208.181±0.00 11.724±0.00 129.476±0.00 840.924±781.53 173.208±161.60 119.367±0.00 259.317±0.00 53.910±0.00 289.576±263.30 29.152±12.48 413.626±302.70 1320.976±890.89 445.485±60.20
ENST00000521327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521569 N/A N/A 19.296±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 58.807±10.75 323.088±0.00 86.098±0.00
ENSG00000145907 ENST00000356245 10.936±0.00 13.955±0.00 4.351±0.00 4.960±0.21 11.204±2.18 14.500±4.89 7.750±3.14 16.857±9.79 8.589±0.69 10.193±1.38 17.803±12.52 19.084±6.86 20.880±6.49 30.162±5.32
ENST00000394123 N/A N/A 2.544±0.00 1.382±0.00 3.709±0.00 5.003±0.83 2.636±0.00 4.237±0.59 4.706±2.65 6.702±0.00 3.206±1.32 6.911±1.64 3.670±1.74 5.727±0.10
ENST00000507878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522761 17.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.066±0.00
ENST00000523519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177556 ENST00000313115 N/A N/A N/A 67.710±0.00 N/A N/A N/A N/A 71.584±0.00 N/A N/A 55.837±0.00 93.844±2.59 N/A
ENST00000520382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213433 ENST00000473923 N/A 0.553±0.00 N/A 0.435±0.00 N/A N/A N/A 0.401±0.00 0.241±0.05 N/A 1.961±0.00 1.265±0.45 0.429±0.03 3.989±0.00
ENST00000518134 2.488±0.00 1.193±0.00 0.181±0.00 1.612±0.00 1.458±0.00 1.391±0.00 0.645±0.00 0.596±0.00 0.536±0.00 0.444±0.00 0.705±0.00 0.395±0.14 0.208±0.00 2.679±0.11
ENSG00000253921 ENST00000518182 0.327±0.00 0.266±0.00 N/A N/A 0.192±0.00 0.175±0.00 N/A 0.118±0.00 0.124±0.00 N/A N/A 0.052±0.00 0.066±0.02 0.300±0.21
ENSG00000272112 ENST00000607135 0.279±0.00 1.163±0.00 N/A 0.510±0.00 1.216±0.00 2.419±0.00 0.239±0.00 0.429±0.00 0.521±0.35 0.520±0.06 0.146±0.00 0.406±0.25 0.287±0.11 1.021±0.60
ENSG00000275765 ENST00000617069 3.645±0.00 2.864±0.00 0.562±0.00 1.153±0.87 2.178±2.12 0.618±0.00 0.618±0.47 1.024±0.35 0.535±0.00 0.650±0.45 0.650±0.59 1.342±0.78 0.804±0.23 5.461±3.66
ENST00000623943 1.780±0.00 N/A 0.253±0.00 N/A N/A N/A 0.413±0.00 N/A 0.293±0.00 0.828±0.00 N/A 2.658±1.69 1.194±0.96 12.182±8.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018585 ENSMUST00000108857 220.910±54.49 270.522±7.58 202.474±43.26 41.333±28.30 188.641±64.61 134.174±9.95 65.976±16.94 277.480±20.16 135.048±35.63 121.446±25.65 29.454±4.23 170.086±59.56 158.108±82.33 53.526±24.18
ENSMUST00000138412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018593 ENSMUST00000018737 188.755±108.31 600.293±52.54 522.189±56.26 23.892±7.87 199.307±60.99 66.005±11.71 N/A 31.281±2.49 19.465±5.35 185.022±28.14 31.809±11.23 165.772±67.83 257.921±62.83 27.732±4.13
ENSMUST00000108858 1075.515±780.70 666.536±208.81 680.218±196.01 34.089±7.82 464.497±120.68 136.978±12.82 98.480±54.36 93.700±45.70 39.419±10.80 635.202±33.23 36.132±8.73 372.586±119.01 445.365±185.15 81.862±46.26
ENSMUST00000123775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130642 1051.618±734.88 522.423±85.55 N/A N/A 397.552±0.00 110.659±10.11 N/A N/A N/A N/A N/A 484.775±61.80 N/A N/A
ENSMUST00000141530 N/A 841.376±55.54 N/A 53.338±0.00 445.872±43.32 179.672±35.55 N/A N/A N/A N/A N/A 603.256±77.54 N/A 176.558±0.00

Loading