C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic helix-loop-helix family, member e23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108878 Bhlhe23-001 ENSMUSG00000045493 10090 - 2:180774381-180776900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungPlacentaTestisENSMUST00000108878
Transcript ID Bladder Brain Liver Lung Placenta Testis
ENSMUST00000108878 0.008±0.00 1.537±1.57 0.006±0.00 0.014±0.00 0.009±0.01 0.051±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068Z CIL_00068Z_0003 CGP 2:180725263-180776900
CIL_0001O2 CIL_0001O2_0002 CGP 2:180774381-180920949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046548 IMP retinal rod cell development
GO:0046671 IMP negative regulation of retinal cell programmed cell death
GO:0046983 IEA protein dimerization activity
GO:0048050 IMP post-embryonic eye morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321870 BHLHE22-001 protein_coding Homo_sapiens 0 257
ENST00000370346 BHLHE23-201 protein_coding Homo_sapiens 0 601
ENST00000612929 BHLHE23-001 protein_coding Homo_sapiens 0 601

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