C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: annexin A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108883 Anxa6-001 ENSMUSG00000018340 10090 - 11:54979108-55033445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108883
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108883 133.717±26.03 31.640±9.09 71.974±1.05 13.261±4.44 75.079±7.90 26.745±5.43 45.098±3.59 21.558±3.17 24.022±7.53 55.896±3.78 57.664±2.73 62.094±10.30 26.170±9.17 1.367±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KR CIL_0001KR_0002 CGP 11:54910785-55033445
CIL_0001KQ CIL_0001KQ_0002 CGP 11:54979108-55078131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0005765 IEA lysosomal membrane
GO:0005925 IEA focal adhesion
GO:0006816 IMP calcium ion transport
GO:0006937 IMP regulation of muscle contraction
GO:0008289 IEA lipid binding
GO:0015276 IEA ligand-gated ion channel activity
GO:0015485 IEA cholesterol binding
GO:0016020 IEA membrane
GO:0031902 IEA late endosome membrane
GO:0034220 IEA ion transmembrane transport
GO:0042803 IEA protein homodimerization activity
GO:0048306 IEA calcium-dependent protein binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051260 IEA protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354546 ANXA6-001 protein_coding Homo_sapiens 0 2601
ENST00000377751 ANXA6-003 protein_coding Homo_sapiens 0 1086
ENST00000517486 ANXA6-010 protein_coding Homo_sapiens 0 215
ENST00000517677 ANXA6-009 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000517707 ANXA6-015 retained_intron Homo_sapiens 0 603
ENST00000517757 ANXA6-008 protein_coding Homo_sapiens 0 527
ENST00000519644 ANXA6-007 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000520054 ANXA6-014 retained_intron Homo_sapiens 0 455
ENST00000520378 ANXA6-005 retained_intron Homo_sapiens 0 252
ENST00000521512 ANXA6-002 protein_coding Homo_sapiens 0 1458
ENST00000521749 ANXA6-013 protein_coding Homo_sapiens 0 584
ENST00000522664 ANXA6-016 protein_coding Homo_sapiens 0 261
ENST00000523714 ANXA6-004 protein_coding Homo_sapiens 0 2531

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