C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: axin interactor, dorsalization associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109166 Aida-201 ENSMUSG00000042901 10090 + 1:183297060-183324501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109166 11.020±2.42 5.395±0.92 18.454±0.91 13.545±7.30 8.695±3.24 4.784±0.62 5.298±1.19 5.842±0.24 6.563±4.87 10.087±1.77 4.478±0.69 7.227±1.57 14.011±2.81 5.351±2.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MU CIL_0005MU_0002 CGP 1:183276342-183324501
CIL_0005MT CIL_0005MT_0002 CGP 1:183297060-183369529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0009953 ISS dorsal/ventral pattern formation
GO:0019904 IPI protein domain specific binding
GO:0043496 IMP regulation of protein homodimerization activity
GO:0043508 IDA negative regulation of JUN kinase activity
GO:0046329 IMP negative regulation of JNK cascade
GO:0048264 ISO determination of ventral identity
GO:2000016 ISO negative regulation of determination of dorsal identity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340020 AIDA-001 protein_coding Homo_sapiens 0 1895
ENST00000355727 AIDA-003 protein_coding Homo_sapiens 0 885
ENST00000427577 RP11-181C21.4-001 processed_pseudogene Homo_sapiens 0 1360
ENST00000456674 AC018463.4-001 processed_pseudogene Homo_sapiens 0 1240
ENST00000470437 AIDA-005 processed_transcript Homo_sapiens 0 911
ENST00000474863 AIDA-002 processed_transcript Homo_sapiens 0 1399
ENST00000495670 AIDA-006 processed_transcript Homo_sapiens 0 392
ENST00000497112 AIDA-004 processed_transcript Homo_sapiens 0 761
ENST00000512016 RP11-597D13.7-002 processed_transcript Homo_sapiens 0 1173
ENST00000514881 RP11-597D13.7-001 transcribed_processed_pseudogene Homo_sapiens 0 1269
ENST00000582646 CTD-2533G20.1-001 processed_pseudogene Homo_sapiens 0 233

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