C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427577 RP11-181C21.4-001 ENSG00000219201 9606 - 1:77810861-77811781 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartOvaryTestisENST00000427577
Transcript ID Adipose Heart Ovary Testis
ENST00000427577 0.024±0.00 0.055±0.02 0.111±0.08 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0001 VISTA 1:77533579-78136618
CIL_0007KB CIL_0007KB_0001 UCNEbase 1:77564480-77948632

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109166 Aida-201 protein_coding Mus_musculus 0 1360
ENSMUST00000159522 Gm16589-001 processed_pseudogene Mus_musculus 0 1338
ENSMUST00000118306 Gm12664-001 processed_pseudogene Mus_musculus 0 1109
ENSMUST00000121276 Gm13674-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000178304 Gm9630-201 processed_pseudogene Mus_musculus 0 359

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