C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109286 Gabra6-003 ENSMUSG00000020428 10090 - 11:42307260-42321072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000109286
Transcript ID Testis
ENSMUST00000109286 0.026±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274545 GABRA6-001 protein_coding Homo_sapiens 0 1478
ENST00000517823 GABRA6-008 protein_coding Homo_sapiens 0 577
ENST00000520000 GABRA6-007 protein_coding Homo_sapiens 0 664
ENST00000521520 GABRA6-002 retained_intron Homo_sapiens 0 220
ENST00000523217 GABRA6-003 protein_coding Homo_sapiens 0 1210
ENST00000523691 GABRA6-009 protein_coding Homo_sapiens 0 403

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