C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517823 GABRA6-008 ENSG00000145863 9606 + 5:161687496-161690241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000517823
Transcript ID Testis
ENST00000517823 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Q CIL_00016Q_0002 CGP 5:161547063-161899969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109286 Gabra6-003 protein_coding Mus_musculus 0 577
ENSMUST00000155218 Gabra6-001 protein_coding Mus_musculus 0 577
ENSMUST00000020703 Gabra6-002 protein_coding Mus_musculus 0 534

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