C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuropilin (NRP) and tolloid (TLL)-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109686 Neto2-201 ENSMUSG00000036902 10090 - 8:85636588-85690973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109686
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109686 0.829±0.70 0.159±0.10 0.270±0.00 11.601±8.14 0.216±0.08 0.193±0.08 0.217±0.04 0.062±0.02 0.072±0.07 0.354±0.07 0.639±0.34 0.696±0.32 0.227±0.09 0.512±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F3 CIL_0002F3_0002 CGP 8:85537640-85690973
CIL_0002VK CIL_0002VK_0002 CGP 8:85636588-85840949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0014069 IDA postsynaptic density
GO:0032983 IEA kainate selective glutamate receptor complex
GO:0035255 IPI ionotropic glutamate receptor binding
GO:0045202 IDA synapse
GO:2000312 IEA regulation of kainate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092351 neto2b-201 protein_coding Danio_rerio 4e-29 135
ENSDART00000136608 neto2b-001 protein_coding Danio_rerio 4e-29 135
ENST00000303155 NETO2-002 protein_coding Homo_sapiens 0 2145
ENST00000421749 AC069157.1-001 processed_pseudogene Homo_sapiens 1e-38 161
ENST00000507871 RP11-959I15.1-001 processed_pseudogene Homo_sapiens 0 1443
ENST00000562435 NETO2-001 protein_coding Homo_sapiens 0 2052
ENST00000562559 NETO2-003 protein_coding Homo_sapiens 0 828
ENST00000563078 NETO2-004 protein_coding Homo_sapiens 0 449
ENST00000564667 NETO2-005 protein_coding Homo_sapiens 0 806

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