C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmegin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109831 Clgn-002 ENSMUSG00000002190 10090 + 8:83389878-83426831 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000109831
Transcript ID Adipose Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000109831 0.018±0.00 7.443±0.00 0.077±0.02 0.032±0.00 0.052±0.00 0.061±0.03 0.063±0.00 0.137±0.05 178.689±245.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0006461 IMP protein complex assembly
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007338 IGI single fertilization
GO:0007339 IMP binding of sperm to zona pellucida
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0044183 IMP protein binding involved in protein folding
GO:0051082 IEA unfolded protein binding
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325617 CLGN-001 protein_coding Homo_sapiens 0 1555
ENST00000414773 CLGN-201 protein_coding Homo_sapiens 0 1555
ENST00000509477 CLGN-004 protein_coding Homo_sapiens 0 562

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