C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110081 Kcnn1-202 ENSMUSG00000002908 10090 - 8:70842049-70857008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000110081
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000110081 0.952±0.00 2.484±0.51 1.513±0.90 1.594±0.18 2.602±0.00 1.546±0.90 0.626±0.22 1.803±0.50 0.097±0.04 0.217±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IDA calmodulin binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016286 IBA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103211 kcnn3-201 protein_coding Danio_rerio 0 592
ENSDART00000131627 kcnn3-001 protein_coding Danio_rerio 0 592
ENST00000222249 KCNN1-001 protein_coding Homo_sapiens 0 1439
ENST00000615435 KCNN1-201 protein_coding Homo_sapiens 0 1441

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