C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222249 KCNN1-001 ENSG00000105642 9606 + 19:17951293-18000080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222249
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222249 0.155±0.00 0.335±0.00 0.122±0.00 0.226±0.00 0.028±0.00 0.199±0.00 0.055±0.00 0.230±0.00 0.071±0.00 0.225±0.14 0.026±0.00 0.425±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IBA:IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IBA plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 TAS voltage-gated potassium channel complex
GO:0015269 TAS:IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IBA:IEA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110078 Kcnn1-201 protein_coding Mus_musculus 0 1476
ENSMUST00000110081 Kcnn1-202 protein_coding Mus_musculus 0 1439
ENSDART00000033922 kcnn1a-001 protein_coding Danio_rerio 0 798
ENSMUST00000000811 Kcnn3-001 protein_coding Mus_musculus 0 723
ENSDART00000147885 kcnn1a-002 protein_coding Danio_rerio 0 555
ENSMUST00000171904 Kcnn4-201 protein_coding Mus_musculus 2e-35 156
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00007 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00007 55

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