C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with SH3 domain, ankyrin repeat and PH domain1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110115 Asap1-203 ENSMUSG00000022377 10090 - 15:64088541-64382919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110115
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110115 4.180±1.58 5.284±1.75 2.150±0.00 5.285±0.73 1.607±0.70 2.312±0.75 2.479±2.09 5.125±1.37 0.726±0.10 5.048±2.03 2.646±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZM CIL_0004ZM_0002 CGP 15:63929097-64382919
CIL_0004ZP CIL_0004ZP_0002 CGP 15:64086857-64922296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 IEA cytoplasm
GO:0008060 IEA:IDA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357668 ASAP1-201 protein_coding Homo_sapiens 0 5140
ENST00000518721 ASAP1-001 protein_coding Homo_sapiens 0 5339
ENST00000519169 ASAP1-003 retained_intron Homo_sapiens 0 861
ENST00000519483 ASAP1-015 protein_coding Homo_sapiens 0 887
ENST00000520189 ASAP1-014 retained_intron Homo_sapiens 0 647
ENST00000520342 ASAP1-010 protein_coding Homo_sapiens 0 745
ENST00000520927 ASAP1-016 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000521057 ASAP1-013 retained_intron Homo_sapiens 0 654
ENST00000521075 ASAP1-002 nonsense_mediated_decay Homo_sapiens 0 5140
ENST00000521426 ASAP1-007 protein_coding Homo_sapiens 0 433
ENST00000524124 ASAP1-004 protein_coding Homo_sapiens 0 4314
ENST00000524299 ASAP1-006 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000524367 ASAP1-009 protein_coding Homo_sapiens 0 1249

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