C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin XVI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110451 Syt16-201 ENSMUSG00000044912 10090 + 12:73997761-74267916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000110451
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000110451 0.073±0.02 0.313±0.13 3.776±2.49 11.028±3.09 0.173±0.07 0.055±0.02 0.022±0.01 0.011±0.01 0.033±0.00 0.290±0.17 0.046±0.03 0.103±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S1 CIL_0000S1_0002 CGP 12:73964530-74267916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 IDA phospholipid binding
GO:0006887 IEA exocytosis
GO:0008150 ND biological_process
GO:0016021 ISS integral component of membrane
GO:0042803 IDA protein homodimerization activity
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000430451 SYT16-201 protein_coding Homo_sapiens 0 1188
ENST00000555409 SYT16-002 nonsense_mediated_decay Homo_sapiens 0 1188
ENST00000568344 SYT16-001 protein_coding Homo_sapiens 0 1269

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