C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000S1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000023608-ENSG00000139973 CGP 9606 14:61762357-62112550
GeneTranscriptPositionBiotype
ENSG00000023608 (SNAPC1)
small nuclear RNA activating complex, polypeptide 1, 43kDa 		ENST00000216294 (SNAPC1-001) 61762357-61796428 protein_coding
ENSG00000139973 (SYT16)
synaptotagmin XVI 		ENST00000430451 (SYT16-201) 62079347-62101709 protein_coding
ENST00000555409 (SYT16-002) 61995834-62101713 nonsense_mediated_decay
ENST00000568344 (SYT16-001) 61995823-62112550 protein_coding
ENSG00000258882 (CTD-2277K2.1)
 ENST00000554138 (CTD-2277K2.1-001) 61811974-61970319 lincRNA
ENST00000554436 (CTD-2277K2.1-002) 61864880-61970313 lincRNA
ENSG00000258956 (COX4I1P1)
cytochrome c oxidase subunit IV isoform 1 pseudogene 1 		ENST00000554239 (COX4I1P1-001) 61831861-61832369 processed_pseudogene
ENSG00000258964 (RP11-618G20.1)
 ENST00000555937 (RP11-618G20.1-001) 61734138-61776260 processed_transcript
ENSG00000279633 (RP11-442G21.2)
 ENST00000624542 (RP11-442G21.2-001) 61801713-61803634 TEC
CIL_0000S1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021113-ENSMUSG00000044912 CGP 10090 12:73964530-74267916
GeneTranscriptPositionBiotype
ENSMUSG00000021113 (Snapc1)
small nuclear RNA activating complex, polypeptide 1 		ENSMUST00000021532 (Snapc1-201) 73964530-73984820 protein_coding
ENSMUSG00000044912 (Syt16)
synaptotagmin XVI 		ENSMUST00000110451 (Syt16-201) 73997761-74267916 protein_coding
ENSMUSG00000100192 (RP23-182N12.2)
predicted gene 29587 		ENSMUST00000189898 (RP23-182N12.2-001) 74222498-74235140 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S1_0001ENSG00000023608ENST00000216294ENSG00000139973ENST00000430451ENST00000555409ENST00000568344ENSG00000258882ENST00000554138ENST00000554436ENSG00000258956ENST00000554239ENSG00000258964ENST00000555937ENSG00000279633ENST00000624542CIL_0000S1_0002ENSMUSG00000021113ENSMUST00000021532ENSMUSG00000044912ENSMUST00000110451ENSMUSG00000100192ENSMUST00000189898
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S1_0001ENSG00000023608ENST00000216294ENSG00000139973ENST00000430451ENST00000555409ENST00000568344ENSG00000258882ENST00000554138ENST00000554436ENSG00000258956ENST00000554239ENSG00000258964ENST00000555937ENSG00000279633ENST00000624542CIL_0000S1_0002ENSMUSG00000021113ENSMUST00000021532ENSMUSG00000044912ENSMUST00000110451ENSMUSG00000100192ENSMUST00000189898
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000023608 ENST00000216294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.784±0.00 7.688±0.00 4.527±0.00 19.249±7.50
ENSG00000139973 ENST00000430451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.714±0.00
ENST00000555409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.11
ENST00000568344 N/A 0.010±0.00 0.066±0.00 4.977±0.35 0.006±0.00 0.019±0.00 0.002±0.00 0.068±0.00 0.155±0.00 0.023±0.02 0.003±0.00 0.018±0.02 0.089±0.04 0.230±0.09
ENSG00000258882 ENST00000554138 N/A N/A N/A 0.223±0.00 N/A N/A N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A
ENST00000554436 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A 1.425±0.62
ENSG00000258956 ENST00000554239 N/A N/A N/A 0.050±0.00 N/A 0.043±0.00 N/A N/A 0.042±0.00 N/A N/A N/A N/A 0.250±0.00
ENSG00000258964 ENST00000555937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 N/A N/A N/A
ENSG00000279633 ENST00000624542 0.005±0.00 0.053±0.00 N/A 0.112±0.02 0.086±0.00 0.035±0.00 0.124±0.00 0.028±0.00 0.026±0.01 0.043±0.01 0.890±0.13 0.061±0.02 0.039±0.00 0.041±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021113 ENSMUST00000021532 1.104±0.25 1.799±0.86 3.965±0.06 5.615±0.53 2.224±0.37 1.468±0.82 1.339±0.78 1.460±0.48 1.559±0.79 2.136±0.57 1.980±0.36 4.102±3.61 11.465±8.68 2.662±1.18
ENSMUSG00000044912 ENSMUST00000110451 0.073±0.02 0.313±0.13 3.776±2.49 11.028±3.09 N/A 0.173±0.07 0.055±0.02 0.022±0.01 0.011±0.01 0.033±0.00 N/A 0.290±0.17 0.046±0.03 0.103±0.06
ENSMUSG00000100192 ENSMUST00000189898 N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A N/A

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