C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein 1 A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110639 Map1a-002 ENSMUSG00000027254 10090 + 2:121295454-121309438 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENSMUST00000110639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000110639 3.598±0.26 1.332±0.28 4.494±1.44 103.278±138.87 1.321±0.13 2.069±0.30 1.183±0.24 1.316±0.16 2.163±0.32 3.427±1.17 0.986±0.63 1.453±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YB CIL_0005YB_0002 CGP 2:121193281-121310832
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600
CIL_000681 CIL_000681_0002 CGP 2:121289600-121355396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005874 IEA microtubule
GO:0007605 IDA sensory perception of sound
GO:0008017 IDA microtubule binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300231 MAP1A-001 protein_coding Homo_sapiens 0 4359
ENST00000324096 MAP1S-001 protein_coding Homo_sapiens 5e-36 158
ENST00000382031 MAP1A-002 protein_coding Homo_sapiens 0 4283
ENST00000457052 AC074212.3-001 protein_coding Homo_sapiens 0.00005 57
ENST00000544059 MAP1S-003 protein_coding Homo_sapiens 5e-36 158
ENST00000594212 MAP1S-002 nonsense_mediated_decay Homo_sapiens 2e-36 158

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