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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005YB_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000067369-ENSG00000166963 | CGP | 9606 | 15:43403061-43531620  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000137822  (TUBGCP4)tubulin, gamma complex associated protein 4 |
ENST00000260383 (TUBGCP4-001)
|
43371101-43405573 | protein_coding | |
|
ENST00000561691 (TUBGCP4-003)
|
43376540-43405319 | nonsense_mediated_decay | ||
|
ENST00000562053 (TUBGCP4-009)
|
43397210-43398383 | retained_intron | ||
|
ENST00000563147 (TUBGCP4-011)
|
43398130-43405544 | protein_coding | ||
|
ENST00000563412 (TUBGCP4-008)
|
43377892-43385916 | nonsense_mediated_decay | ||
|
ENST00000563517 (TUBGCP4-006)
|
43371073-43377903 | nonsense_mediated_decay | ||
|
ENST00000563963 (TUBGCP4-004)
|
43394081-43405323 | retained_intron | ||
|
ENST00000564079 (TUBGCP4-002)
|
43371115-43409771 | protein_coding | ||
|
ENST00000564511 (TUBGCP4-007)
|
43377598-43383504 | retained_intron | ||
|
ENST00000565548 (TUBGCP4-012)
|
43401806-43407060 | protein_coding | ||
|
ENST00000566251 (TUBGCP4-010)
|
43401818-43405328 | nonsense_mediated_decay | ||
|
ENST00000570081 (TUBGCP4-005)
|
43369221-43376624 | processed_transcript | ||
|
ENSG00000166963 (MAP1A) microtubule-associated protein 1A |
ENST00000300231 (MAP1A-001)
|
43517625-43531620 | protein_coding | |
|
ENST00000382031 (MAP1A-002)
|
43510958-43531620 | protein_coding | ||
|
ENSG00000275702 (AC019011.1) |
ENST00000617450 (AC019011.1-201)
|
43519409-43519489 | miRNA | |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
| CIL_0005YB_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000043909-ENSMUSG00000027254 | CGP | 10090 | 2:121193281-121310832 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027254 (Map1a) microtubule-associated protein 1 A |
ENSMUST00000094639 (Map1a-001)
|
121289600-121310832 | protein_coding | |
|
ENSMUST00000110639 (Map1a-002)
|
121295454-121309438 | protein_coding | ||
|
ENSMUST00000131901 (Map1a-004)
|
121289770-121291073 | processed_transcript | ||
|
ENSMUST00000133283 (Map1a-003)
|
121295463-121307621 | processed_transcript | ||
|
ENSMUSG00000033526 (Ppip5k1) diphosphoinositol pentakisphosphate kinase 1 |
ENSMUST00000052029 (Ppip5k1-001)
|
121310561-121351017 | protein_coding | |
|
ENSMUST00000110625 (Ppip5k1-004)
|
121310899-121355396 | protein_coding | ||
|
ENSMUST00000110626 (Ppip5k1-006)
|
121310893-121350985 | protein_coding | ||
|
ENSMUST00000110627 (Ppip5k1-014)
|
121310561-121355333 | protein_coding | ||
|
ENSMUST00000110628 (Ppip5k1-003)
|
121310561-121355330 | protein_coding | ||
|
ENSMUST00000127255 (Ppip5k1-012)
|
121321768-121336733 | protein_coding | ||
|
ENSMUST00000129276 (Ppip5k1-005)
|
121346628-121355330 | retained_intron | ||
|
ENSMUST00000131661 (Ppip5k1-007)
|
121347048-121355075 | retained_intron | ||
|
ENSMUST00000132114 (Ppip5k1-016)
|
121321655-121337163 | protein_coding | ||
|
ENSMUST00000132613 (Ppip5k1-017)
|
121321690-121334504 | protein_coding | ||
|
ENSMUST00000132617 (Ppip5k1-011)
|
121328424-121337023 | retained_intron | ||
|
ENSMUST00000134644 (Ppip5k1-002)
|
121332073-121355077 | retained_intron | ||
|
ENSMUST00000134796 (Ppip5k1-013)
|
121350477-121355284 | protein_coding | ||
|
ENSMUST00000137087 (Ppip5k1-015)
|
121343531-121348791 | nonsense_mediated_decay | ||
|
ENSMUST00000140764 (Ppip5k1-008)
|
121348192-121355072 | retained_intron | ||
|
ENSMUST00000142364 (Ppip5k1-010)
|
121334224-121341985 | retained_intron | ||
|
ENSMUST00000150081 (Ppip5k1-009)
|
121340358-121355311 | retained_intron | ||
|
ENSMUST00000155568 (Ppip5k1-018)
|
121327645-121337159 | protein_coding | ||
|
ENSMUSG00000043909 (Trp53bp1) transformation related protein 53 binding protein 1 |
ENSMUST00000110647 (Trp53bp1-002)
|
121194838-121271341 | protein_coding | |
|
ENSMUST00000110648 (Trp53bp1-001)
|
121194838-121271407 | protein_coding | ||
|
ENSMUST00000124031 (Trp53bp1-011)
|
121232100-121235821 | processed_transcript | ||
|
ENSMUST00000124060 (Trp53bp1-008)
|
121269630-121271370 | retained_intron | ||
|
ENSMUST00000124411 (Trp53bp1-014)
|
121208845-121221232 | retained_intron | ||
|
ENSMUST00000124554 (Trp53bp1-019)
|
121208420-121221241 | nonsense_mediated_decay | ||
|
ENSMUST00000129752 (Trp53bp1-010)
|
121236824-121252027 | nonsense_mediated_decay | ||
|
ENSMUST00000131245 (Trp53bp1-003)
|
121216143-121271321 | protein_coding | ||
|
ENSMUST00000131426 (Trp53bp1-009)
|
121258886-121270286 | retained_intron | ||
|
ENSMUST00000132812 (Trp53bp1-015)
|
121205081-121208574 | processed_transcript | ||
|
ENSMUST00000135890 (Trp53bp1-006)
|
121193281-121211975 | processed_transcript | ||
|
ENSMUST00000136617 (Trp53bp1-004)
|
121256514-121271369 | processed_transcript | ||
|
ENSMUST00000140285 (Trp53bp1-005)
|
121267312-121271361 | retained_intron | ||
|
ENSMUST00000140582 (Trp53bp1-013)
|
121211308-121218436 | processed_transcript | ||
|
ENSMUST00000142400 (Trp53bp1-017)
|
121228369-121235689 | protein_coding | ||
|
ENSMUST00000147540 (Trp53bp1-007)
|
121198251-121236006 | nonsense_mediated_decay | ||
|
ENSMUST00000147554 (Trp53bp1-016)
|
121199639-121204981 | processed_transcript | ||
|
ENSMUST00000154426 (Trp53bp1-018)
|
121202693-121207762 | nonsense_mediated_decay | ||
|
ENSMUST00000156493 (Trp53bp1-012)
|
121215889-121221379 | retained_intron | ||
|
ENSMUSG00000087704 (Gm14978) predicted gene 14978 |
ENSMUST00000129000 (Gm14978-001)
|
121293703-121296008 | antisense | |
|
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Expression Patterns
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