C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005YB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000067369-ENSG00000166963 CGP 9606 15:43403061-43531620
GeneTranscriptPositionBiotype
ENSG00000137822 (TUBGCP4)
tubulin, gamma complex associated protein 4
ENST00000260383 (TUBGCP4-001) 43371101-43405573 protein_coding
ENST00000561691 (TUBGCP4-003) 43376540-43405319 nonsense_mediated_decay
ENST00000562053 (TUBGCP4-009) 43397210-43398383 retained_intron
ENST00000563147 (TUBGCP4-011) 43398130-43405544 protein_coding
ENST00000563412 (TUBGCP4-008) 43377892-43385916 nonsense_mediated_decay
ENST00000563517 (TUBGCP4-006) 43371073-43377903 nonsense_mediated_decay
ENST00000563963 (TUBGCP4-004) 43394081-43405323 retained_intron
ENST00000564079 (TUBGCP4-002) 43371115-43409771 protein_coding
ENST00000564511 (TUBGCP4-007) 43377598-43383504 retained_intron
ENST00000565548 (TUBGCP4-012) 43401806-43407060 protein_coding
ENST00000566251 (TUBGCP4-010) 43401818-43405328 nonsense_mediated_decay
ENST00000570081 (TUBGCP4-005) 43369221-43376624 processed_transcript
ENSG00000166963 (MAP1A)
microtubule-associated protein 1A
ENST00000300231 (MAP1A-001) 43517625-43531620 protein_coding
ENST00000382031 (MAP1A-002) 43510958-43531620 protein_coding
ENSG00000275702 (AC019011.1)
ENST00000617450 (AC019011.1-201) 43519409-43519489 miRNA
CIL_0005YB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043909-ENSMUSG00000027254 CGP 10090 2:121193281-121310832
GeneTranscriptPositionBiotype
ENSMUSG00000027254 (Map1a)
microtubule-associated protein 1 A
ENSMUST00000094639 (Map1a-001) 121289600-121310832 protein_coding
ENSMUST00000110639 (Map1a-002) 121295454-121309438 protein_coding
ENSMUST00000131901 (Map1a-004) 121289770-121291073 processed_transcript
ENSMUST00000133283 (Map1a-003) 121295463-121307621 processed_transcript
ENSMUSG00000033526 (Ppip5k1)
diphosphoinositol pentakisphosphate kinase 1
ENSMUST00000052029 (Ppip5k1-001) 121310561-121351017 protein_coding
ENSMUST00000110625 (Ppip5k1-004) 121310899-121355396 protein_coding
ENSMUST00000110626 (Ppip5k1-006) 121310893-121350985 protein_coding
ENSMUST00000110627 (Ppip5k1-014) 121310561-121355333 protein_coding
ENSMUST00000110628 (Ppip5k1-003) 121310561-121355330 protein_coding
ENSMUST00000127255 (Ppip5k1-012) 121321768-121336733 protein_coding
ENSMUST00000129276 (Ppip5k1-005) 121346628-121355330 retained_intron
ENSMUST00000131661 (Ppip5k1-007) 121347048-121355075 retained_intron
ENSMUST00000132114 (Ppip5k1-016) 121321655-121337163 protein_coding
ENSMUST00000132613 (Ppip5k1-017) 121321690-121334504 protein_coding
ENSMUST00000132617 (Ppip5k1-011) 121328424-121337023 retained_intron
ENSMUST00000134644 (Ppip5k1-002) 121332073-121355077 retained_intron
ENSMUST00000134796 (Ppip5k1-013) 121350477-121355284 protein_coding
ENSMUST00000137087 (Ppip5k1-015) 121343531-121348791 nonsense_mediated_decay
ENSMUST00000140764 (Ppip5k1-008) 121348192-121355072 retained_intron
ENSMUST00000142364 (Ppip5k1-010) 121334224-121341985 retained_intron
ENSMUST00000150081 (Ppip5k1-009) 121340358-121355311 retained_intron
ENSMUST00000155568 (Ppip5k1-018) 121327645-121337159 protein_coding
ENSMUSG00000043909 (Trp53bp1)
transformation related protein 53 binding protein 1
ENSMUST00000110647 (Trp53bp1-002) 121194838-121271341 protein_coding
ENSMUST00000110648 (Trp53bp1-001) 121194838-121271407 protein_coding
ENSMUST00000124031 (Trp53bp1-011) 121232100-121235821 processed_transcript
ENSMUST00000124060 (Trp53bp1-008) 121269630-121271370 retained_intron
ENSMUST00000124411 (Trp53bp1-014) 121208845-121221232 retained_intron
ENSMUST00000124554 (Trp53bp1-019) 121208420-121221241 nonsense_mediated_decay
ENSMUST00000129752 (Trp53bp1-010) 121236824-121252027 nonsense_mediated_decay
ENSMUST00000131245 (Trp53bp1-003) 121216143-121271321 protein_coding
ENSMUST00000131426 (Trp53bp1-009) 121258886-121270286 retained_intron
ENSMUST00000132812 (Trp53bp1-015) 121205081-121208574 processed_transcript
ENSMUST00000135890 (Trp53bp1-006) 121193281-121211975 processed_transcript
ENSMUST00000136617 (Trp53bp1-004) 121256514-121271369 processed_transcript
ENSMUST00000140285 (Trp53bp1-005) 121267312-121271361 retained_intron
ENSMUST00000140582 (Trp53bp1-013) 121211308-121218436 processed_transcript
ENSMUST00000142400 (Trp53bp1-017) 121228369-121235689 protein_coding
ENSMUST00000147540 (Trp53bp1-007) 121198251-121236006 nonsense_mediated_decay
ENSMUST00000147554 (Trp53bp1-016) 121199639-121204981 processed_transcript
ENSMUST00000154426 (Trp53bp1-018) 121202693-121207762 nonsense_mediated_decay
ENSMUST00000156493 (Trp53bp1-012) 121215889-121221379 retained_intron
ENSMUSG00000087704 (Gm14978)
predicted gene 14978
ENSMUST00000129000 (Gm14978-001) 121293703-121296008 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YB_0001ENSG00000137822ENST00000260383ENST00000561691ENST00000562053ENST00000563147ENST00000563412ENST00000563517ENST00000563963ENST00000564079ENST00000564511ENST00000565548ENST00000566251ENST00000570081ENSG00000166963ENST00000300231ENST00000382031ENSG00000275702ENST00000617450CIL_0005YB_0002ENSMUSG00000027254ENSMUST00000094639ENSMUST00000110639ENSMUST00000131901ENSMUST00000133283ENSMUSG00000033526ENSMUST00000052029ENSMUST00000110625ENSMUST00000110626ENSMUST00000110627ENSMUST00000110628ENSMUST00000127255ENSMUST00000129276ENSMUST00000131661ENSMUST00000132114ENSMUST00000132613ENSMUST00000132617ENSMUST00000134644ENSMUST00000134796ENSMUST00000137087ENSMUST00000140764ENSMUST00000142364ENSMUST00000150081ENSMUST00000155568ENSMUSG00000043909ENSMUST00000110647ENSMUST00000110648ENSMUST00000124031ENSMUST00000124060ENSMUST00000124411ENSMUST00000124554ENSMUST00000129752ENSMUST00000131245ENSMUST00000131426ENSMUST00000132812ENSMUST00000135890ENSMUST00000136617ENSMUST00000140285ENSMUST00000140582ENSMUST00000142400ENSMUST00000147540ENSMUST00000147554ENSMUST00000154426ENSMUST00000156493ENSMUSG00000087704ENSMUST00000129000
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YB_0001ENSG00000137822ENST00000260383ENST00000564079ENSG00000166963ENST00000300231ENST00000382031ENSG00000275702ENST00000617450CIL_0005YB_0002ENSMUSG00000027254ENSMUST00000094639ENSMUST00000110639ENSMUSG00000033526ENSMUST00000052029ENSMUST00000110625ENSMUST00000110626ENSMUST00000110627ENSMUST00000127255ENSMUST00000131661ENSMUST00000132617ENSMUST00000134644ENSMUST00000140764ENSMUST00000150081ENSMUSG00000043909ENSMUST00000110647ENSMUST00000110648ENSMUST00000131245ENSMUST00000135890ENSMUST00000140582ENSMUST00000147540ENSMUSG00000087704ENSMUST00000129000
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137822 ENST00000260383 N/A N/A N/A N/A N/A N/A N/A 1.880±0.00 N/A N/A N/A N/A N/A N/A
ENST00000561691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564079 N/A 1.468±0.00 N/A N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A N/A
ENST00000564511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166963 ENST00000300231 4.779±0.00 3.299±0.00 N/A 79.260±61.35 3.233±1.28 5.348±4.02 6.440±5.74 0.908±0.89 3.132±3.08 1.627±0.98 0.448±0.11 4.734±5.66 2.227±0.85 7.202±5.09
ENST00000382031 1.546±0.00 N/A 0.065±0.00 11.115±0.00 N/A N/A 1.062±0.27 N/A N/A N/A 0.815±0.00 1.235±0.72 0.530±0.00 2.523±0.00
ENSG00000275702 ENST00000617450 N/A N/A N/A 0.885±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027254 ENSMUST00000094639 N/A N/A N/A 1.467±0.11 N/A N/A N/A N/A N/A 0.799±0.00 N/A 1.023±0.31 N/A 1.614±0.00
ENSMUST00000110639 3.598±0.26 1.332±0.28 4.494±1.44 103.278±138.87 1.321±0.13 2.069±0.30 1.183±0.24 N/A N/A 1.316±0.16 2.163±0.32 3.427±1.17 0.986±0.63 1.453±0.05
ENSMUST00000131901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033526 ENSMUST00000052029 6.445±0.00 N/A 2.672±0.00 N/A 3.950±0.00 N/A 2.098±0.37 2.262±0.00 0.525±0.17 N/A N/A N/A 0.792±0.15 4.510±0.00
ENSMUST00000110625 5.804±0.16 6.245±1.17 4.126±0.71 N/A 6.835±1.64 8.308±2.17 3.583±2.12 6.365±2.63 0.596±0.23 3.270±0.42 4.748±1.68 4.619±1.37 1.269±0.03 7.484±0.91
ENSMUST00000110626 N/A 3.287±0.65 N/A 3.741±0.25 8.357±2.17 N/A 2.960±0.00 3.871±0.00 0.369±0.15 N/A N/A 3.455±0.73 N/A 3.655±0.17
ENSMUST00000110627 N/A N/A N/A N/A N/A 4.321±0.00 N/A N/A N/A 2.688±0.00 10.931±0.00 5.736±0.72 1.093±0.00 2.917±0.00
ENSMUST00000110628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127255 N/A 12.613±1.74 N/A N/A N/A N/A N/A N/A 1.288±0.08 N/A N/A N/A N/A N/A
ENSMUST00000129276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131661 N/A N/A N/A N/A N/A N/A N/A N/A 1.972±0.83 N/A N/A N/A N/A N/A
ENSMUST00000132114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132617 N/A N/A N/A N/A N/A N/A N/A N/A 0.809±0.19 N/A N/A N/A N/A N/A
ENSMUST00000134644 N/A N/A N/A N/A N/A 7.124±0.00 N/A N/A 0.369±0.06 N/A N/A N/A 3.292±0.00 N/A
ENSMUST00000134796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140764 N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.220±0.00 7.459±0.00
ENSMUST00000155568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043909 ENSMUST00000110647 N/A N/A N/A 7.078±0.00 1.692±0.00 N/A N/A N/A 2.485±0.00 N/A N/A 6.776±2.07 2.737±0.74 N/A
ENSMUST00000110648 5.348±2.41 3.806±0.43 7.189±1.01 22.948±2.97 3.562±1.09 3.520±0.94 1.773±0.22 2.100±0.31 3.494±2.71 3.999±1.08 1.914±0.42 6.083±1.48 4.373±0.98 4.912±0.59
ENSMUST00000124031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131245 N/A N/A N/A 30.297±0.00 N/A N/A N/A N/A N/A N/A N/A 11.957±0.00 11.032±0.00 29.045±0.00
ENSMUST00000131426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.537±2.27
ENSMUST00000136617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.038±7.95 N/A N/A
ENSMUST00000142400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147540 6.970±2.55 5.875±0.53 7.600±2.28 24.184±1.36 N/A 3.739±0.00 2.530±0.17 3.477±0.00 11.183±4.20 3.230±0.00 1.401±0.00 8.237±2.03 7.389±2.81 8.425±1.95
ENSMUST00000147554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087704 ENSMUST00000129000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.475±0.00

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