C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Cu++ transporting, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110738 Atp7b-002 ENSMUSG00000006567 10090 - 8:21994651-22060019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENSMUST00000110738
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000110738 0.120±0.02 0.024±0.00 0.324±0.00 0.067±0.01 0.058±0.00 0.007±0.00 2.706±0.00 0.031±0.02 0.090±0.07 0.248±0.12 0.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JJ CIL_0002JJ_0002 CGP 8:21969775-22060305
CIL_0000MJ CIL_0000MJ_0002 CGP 8:21992785-22071627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004008 IDA copper-exporting ATPase activity
GO:0005507 IEA copper ion binding
GO:0005524 IEA ATP binding
GO:0005802 IDA trans-Golgi network
GO:0006825 IMP copper ion transport
GO:0006878 IMP cellular copper ion homeostasis
GO:0006882 IMP cellular zinc ion homeostasis
GO:0007595 IMP lactation
GO:0008152 IEA metabolic process
GO:0015680 IMP intracellular copper ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0035434 IDA copper ion transmembrane transport
GO:0043682 IDA copper-transporting ATPase activity
GO:0060003 IDA copper ion export

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242839 ATP7B-002 protein_coding Homo_sapiens 0 3314
ENST00000344297 ATP7B-201 protein_coding Homo_sapiens 0 1589
ENST00000400366 ATP7B-202 protein_coding Homo_sapiens 0 3947
ENST00000400370 ATP7B-203 protein_coding Homo_sapiens 0 1925
ENST00000418097 ATP7B-204 protein_coding Homo_sapiens 0 1729
ENST00000448424 ATP7B-205 protein_coding Homo_sapiens 0 2222
ENST00000466629 ATP7B-005 processed_transcript Homo_sapiens 0 446
ENST00000482841 ATP7B-003 processed_transcript Homo_sapiens 0 686
ENST00000603437 RP11-863N1.4-001 processed_pseudogene Homo_sapiens 0 388

Loading