C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sh3 domain YSC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110880 Sh3yl1-002 ENSMUSG00000020669 10090 + 12:30911692-30960151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000110880
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000110880 0.140±0.08 0.162±0.00 1.400±0.27 0.407±0.00 2.204±0.00 0.483±0.00 0.179±0.00 0.342±0.26 1.135±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006661 IMP phosphatidylinositol biosynthetic process
GO:0019902 ISO phosphatase binding
GO:1900027 IMP regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356150 SH3YL1-001 protein_coding Homo_sapiens 0 865
ENST00000402632 SH3YL1-004 protein_coding Homo_sapiens 7.00649e-44 183
ENST00000403657 SH3YL1-011 protein_coding Homo_sapiens 0 289
ENST00000403658 SH3YL1-005 protein_coding Homo_sapiens 0 289
ENST00000403712 SH3YL1-002 protein_coding Homo_sapiens 0 289
ENST00000405430 SH3YL1-003 protein_coding Homo_sapiens 0 865
ENST00000415368 SH3YL1-016 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000431160 SH3YL1-019 protein_coding Homo_sapiens 9.00054e-42 174
ENST00000451005 SH3YL1-020 protein_coding Homo_sapiens 0 241
ENST00000454318 SH3YL1-023 protein_coding Homo_sapiens 5.99756e-43 178
ENST00000463865 SH3YL1-007 processed_transcript Homo_sapiens 0 865
ENST00000468321 SH3YL1-006 processed_transcript Homo_sapiens 0 833
ENST00000471948 SH3YL1-010 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000473104 SH3YL1-008 processed_transcript Homo_sapiens 0 289
ENST00000475027 SH3YL1-024 processed_transcript Homo_sapiens 5.99756e-43 178
ENST00000479739 SH3YL1-009 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000488044 SH3YL1-022 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000488979 SH3YL1-017 processed_transcript Homo_sapiens 5.00264e-43 178

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