C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: canopy 4 homolog (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110934 Cnpy4-001 ENSMUSG00000036968 10090 + 5:138187485-138193918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110934
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110934 4.827±1.06 0.850±0.20 8.836±0.45 6.723±0.51 2.225±0.85 1.829±0.31 1.186±0.29 2.817±0.45 3.936±3.27 4.276±1.45 0.948±0.14 5.460±4.77 10.663±2.34 1.127±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0005LJ CIL_0005LJ_0002 CGP 5:138178617-138193918
CIL_0003FP CIL_0003FP_0002 CGP 5:138187485-138195621

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0032880 ISO regulation of protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262932 CNPY4-001 protein_coding Homo_sapiens 0 671
ENST00000462193 CNPY4-002 retained_intron Homo_sapiens 0 388
ENST00000480692 CNPY4-003 processed_transcript Homo_sapiens 0 569
ENST00000483756 CNPY4-005 processed_transcript Homo_sapiens 0 388

Loading