C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005LJ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000106290-ENSG00000166997 | CGP | 9606 | 7:100107070-100125511  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000106290  (TAF6)TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
ENST00000344095 (TAF6-001)
|
100107079-100119346 | protein_coding | |
|
ENST00000417349 (TAF6-013)
|
100113882-100119348 | protein_coding | ||
|
ENST00000421980 (TAF6-003)
|
100107070-100119359 | nonsense_mediated_decay | ||
|
ENST00000431404 (TAF6-018)
|
100114169-100119304 | protein_coding | ||
|
ENST00000437822 (TAF6-002)
|
100107168-100119841 | protein_coding | ||
|
ENST00000440225 (TAF6-010)
|
100111965-100119317 | protein_coding | ||
|
ENST00000449571 (TAF6-008)
|
100113401-100119567 | protein_coding | ||
|
ENST00000451699 (TAF6-009)
|
100113670-100119372 | protein_coding | ||
|
ENST00000452041 (TAF6-007)
|
100107078-100119364 | protein_coding | ||
|
ENST00000452438 (TAF6-014)
|
100112847-100119364 | protein_coding | ||
|
ENST00000453269 (TAF6-004)
|
100107070-100119398 | protein_coding | ||
|
ENST00000460673 (TAF6-012)
|
100114182-100119356 | protein_coding | ||
|
ENST00000472509 (TAF6-016)
|
100107078-100114558 | protein_coding | ||
|
ENST00000487115 (TAF6-006)
|
100110077-100111324 | retained_intron | ||
|
ENST00000487288 (TAF6-015)
|
100111799-100118976 | retained_intron | ||
|
ENST00000493322 (TAF6-017)
|
100111954-100119349 | protein_coding | ||
|
ENST00000497233 (TAF6-011)
|
100114229-100119366 | processed_transcript | ||
|
ENST00000520135 (TAF6-020)
|
100113642-100119349 | protein_coding | ||
|
ENST00000523306 (TAF6-019)
|
100113349-100119339 | protein_coding | ||
|
ENSG00000166997 (CNPY4) canopy FGF signaling regulator 4 |
ENST00000262932 (CNPY4-001)
|
100119613-100125511 | protein_coding | |
|
ENST00000462193 (CNPY4-002)
|
100122259-100125180 | retained_intron | ||
|
ENST00000470153 (CNPY4-004)
|
100119955-100121399 | processed_transcript | ||
|
ENST00000480692 (CNPY4-003)
|
100122052-100125076 | processed_transcript | ||
|
ENST00000483756 (CNPY4-005)
|
100120026-100122906 | processed_transcript | ||
|
ENSG00000242798 (RP11-506M12.1) |
ENST00000494221 (RP11-506M12.1-001)
|
100115214-100127139 | antisense | |
| CIL_0005LJ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000036980-ENSMUSG00000036968 | CGP | 10090 | 5:138178617-138193918 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000019518 (Ap4m1) adaptor-related protein complex AP-4, mu 1 |
ENSMUST00000019662 (Ap4m1-001)
|
138172002-138178708 | protein_coding | |
|
ENSMUST00000134100 (Ap4m1-007)
|
138176569-138178687 | retained_intron | ||
|
ENSMUST00000142687 (Ap4m1-006)
|
138174786-138177200 | retained_intron | ||
|
ENSMUST00000143241 (Ap4m1-002)
|
138172068-138178681 | nonsense_mediated_decay | ||
|
ENSMUST00000151318 (Ap4m1-004)
|
138172005-138175013 | protein_coding | ||
|
ENSMUST00000155745 (Ap4m1-005)
|
138172582-138174944 | retained_intron | ||
|
ENSMUST00000157031 (Ap4m1-003)
|
138172047-138174372 | retained_intron | ||
|
ENSMUSG00000036968 (Cnpy4) canopy 4 homolog (zebrafish) |
ENSMUST00000110932 (Cnpy4-002)
|
138189917-138192597 | protein_coding | |
|
ENSMUST00000110934 (Cnpy4-001)
|
138187485-138193918 | protein_coding | ||
|
ENSMUST00000130126 (Cnpy4-003)
|
138190112-138192151 | retained_intron | ||
|
ENSMUSG00000036980 (Taf6) TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor |
ENSMUST00000048698 (Taf6-002)
|
138178617-138187226 | protein_coding | |
|
ENSMUST00000110936 (Taf6-001)
|
138178617-138187451 | protein_coding | ||
|
ENSMUST00000110937 (Taf6-005)
|
138178620-138187205 | protein_coding | ||
|
ENSMUST00000123415 (Taf6-003)
|
138182675-138187226 | protein_coding | ||
|
ENSMUST00000130473 (Taf6-006)
|
138180148-138181468 | retained_intron | ||
|
ENSMUST00000139276 (Taf6-007)
|
138183917-138187215 | protein_coding | ||
|
ENSMUST00000153117 (Taf6-004)
|
138178628-138187221 | nonsense_mediated_decay | ||
Expression Patterns
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